Cellular Proteome Research

Pathogenic bacteria, viruses and fungi utilize and alter physiological cellular processes of the infected host. Our studies focus on the identification of unknown processes in complex and molecular networks, which are involved in infectious diseases.

Leader

Publications

  • Authors: Zeller,M.P.; Barty,R.; Aandahl,A.; Apelseth,T.O.; Callum,J.; Dunbar,N.M.; Elahie,A.; Garritsen,H.; Hancock,H.; Kutner,J.M.; Manukian,B.; Mizuta,S.; Okuda,M.; Pagano,M.B.; Poglod,R.; Rushford,K.; Selleng,K.; Sorensen,C.H.; Sprogoe,U.; Staves,J.; Weiland,T.; Wendel,S.; Wood,E.M.; van de,Watering L.; van Wordragen-Vlaswinkel,M.; Ziman,A.; Jan,Zwaginga J.; Murphy,M.F.; Heddle,N.M.; Yazer,M.H.; ( Year: 2017). Title: An international investigation into O red blood cell unit administration in hospitals: the GRoup O Utilization Patterns (GROUP) study. PubMed
  • Authors: Hoffmann,G.; Klawonn,F.; ( Year: 2017). Title: Big Data in der Labormedizin: Von der Utopie zur Strategie. Journal: Trillum Diagnostik Volume: 14 Issue: 1, S-Page: 24- E-Page: 26 DOI: - PubMed
  • Authors: Dreiseikelmann,B.; Bunk,B.; Sproer,C.; Rohde,M.; Nimtz,M.; Wittmann,J.; ( Year: 2017). Title: Characterization and genome comparisons of three Achromobacter phages of the family Siphoviridae. Journal: Arch.Virol. DOI: 10.1007/s00705-017-3347-8 PubMed
  • Authors: Boehme,J.D.; Stegemann-Koniszewski,S.; Autengruber,A.; Peters,N.; Wissing,J.; Jänsch,L.; Jeron,A.; Bruder,D.; ( Year: 2017). Title: Chronic lung inflammation primes humoral immunity and augments antipneumococcal resistance. Journal: Sci.Rep. Volume: 7 Issue: 1, S-Page: 4972 DOI: 10.1038/s41598-017-05212-4 PubMed
  • Authors: Lingel,H.; Wissing,J.; Arra,A.; Schanze,D.; Lienenklaus,S.; Klawonn,F.; Pierau,M.; Zenker,M.; Jänsch,L.; Brunner-Weinzierl,M.C.; ( Year: 2017). Title: CTLA-4-mediated posttranslational modifications direct cytotoxic T-lymphocyte differentiation. Journal: Cell Death.Differ. DOI: 10.1038/cdd.2017.102 HZI repository PubMed
  • Authors: Bloss,S.; Klemann,C.; Rother,A.K.; Mehmecke,S.; Schumacher,U.; Mucke,U.; Mucke,M.; Stieber,C.; Klawonn,F.; Kortum,X.; Lechner,W.; Grigull,L.; ( Year: 2017). Title: Diagnostic needs for rare diseases and shared prediagnostic phenomena: Results of a German-wide expert Delphi survey. Volume: 12 Issue: 2, S-Page: e0172532 PubMed
  • Authors: Blöß,S.; Klemann,C.; Rother,A.K.; Mehmecke,S.; Schumacher,U.; Mücke,U.; Mücke,M.; Stieber,C.; Klawonn,F.; Kortum,X.; Lechner,W.; Grigull,L.; ( Year: 2017). Title: Diagnostic needs for rare diseases and shared prediagnostic phenomena: Results of a German-wide expert Delphi survey. Journal: PLoS ONE Volume: 12 Issue: 2, S-Page: e0172532 DOI: 10.1371/journal.pone.0172532 WEBURLS
  • Authors: Tschumitschew,K.; Klawonn,F.; ( Year: 2017). Title: Effects of drift and noise on the optimal sliding window size for data stream regression models. Journal: Commun Stat Theory Methods Volume: 46 Issue: 10, S-Page: 5109- E-Page: 5132 DOI: 10.1080/03610926.2015.1096388 WEBURLS
  • Authors: Li,Z.; Nimtz,M.; Rinas,U.; ( Year: 2017). Title: Global proteome response of Escherichia coli BL21 to production of human basic fribroblast growth factor in complex and defined medium. Journal: Engineering in Life Sciences DOI: 10.1002/elsc.201700036
  • Authors: Biswas,S.; Sarkar,A.; Misra,R.; ( Year: 2017). Title: Iron affinity gel and gallium immobilized metal affinity chromatographic technique for phosphopeptide enrichment: a comparative study. Journal: Biotechnol.Biotechnol.Equip. Volume: 31 Issue: 3, S-Page: 639- E-Page: 646 DOI: 10.1080/13102818.2017.1293492 WEBURLS
  • Authors: Mucke,U.; Klemann,C.; Baumann,U.; Meyer-Bahlburg,A.; Kortum,X.; Klawonn,F.; Lechner,W.M.; Grigull,L.; ( Year: 2017). Title: Patient's Experience in Pediatric Primary Immunodeficiency Disorders: Computerized Classification of Questionnaires. Journal: Front Immunol. Volume: 8, S-Page: 384 PubMed
  • Authors: Bietenbeck,A.; Thaler,M.A.; Luppa,P.B.; Klawonn,F.; ( Year: 2017). Title: Stronger Together: Aggregated Z-values of Traditional Quality Control Measurements and Patient Medians Improve Detection of Biases. Journal: Clin.Chem. Volume: 63 Issue: 8, S-Page: 1377- E-Page: 1387 DOI: 10.1373/clinchem.2016.269845 PubMed
  • Authors: van,Ham M.; Teich,R.; Philipsen,L.; Niemz,J.; Amsberg,N.; Wissing,J.; Nimtz,M.; Grobe,L.; Kliche,S.; Thiel,N.; Klawonn,F.; Hubo,M.; Jonuleit,H.; Reichardt,P.; Muller,A.J.; Hühn,J.; Jänsch,L.; ( Year: 2017). Title: TCR signalling network organization at the immunological synapses of murine regulatory T cells. Journal: European Journal of Immunology PubMed
  • Authors: Niemz,J.; Kliche,S.; Pils,M.C.; Morrison,E.; Manns,A.; Freund,C.; Crittenden,J.R.; Graybiel,A.M.; Galla,M.; Jänsch,L.; Hühn,J.; ( Year: 2017). Title: The Guanine-Nucleotide Exchange Factor Caldag Gefi Fine-Tunes Functional Properties of Regulatory T Cells. Journal: Eur.J.Microbiol.Immunol.(Bp) Volume: 7 Issue: 2, S-Page: 112- E-Page: 126 DOI: 10.1556/1886.2017.00007 HZI repository PubMed
  • Authors: Hoffmann,G.; Klawonn,F.; Lichtinghagen,R.; Orth,M.; ( Year: 2017). Title: The zlog-value as basis for the standardization of laboratory results. Journal: LaboratoriumsMedizin Volume: 41 Issue: 1, S-Page: 23- E-Page: 32 DOI: 10.1515/labmed-2016-0087 PubMed
  • Authors: Stieber,C.; Mucke,M.; Windheuser,I.C.; Grigull,L.; Klawonn,F.; Tunc,S.; Munchau,A.; Klockgether,T.; ( Year: 2017). Title: [On the fast track to diagnosis : Recommendations for patients without a diagnosis]. Journal: Bundesgesundheitsblatt.Gesundheitsforschung.Gesundheitsschutz. PubMed
  • Authors: Abidi,N.; Franke,R.; Findeisen,P.; Klawonn,F.; ( Year: 2016). Title: Alignment of time-resolved data from high throughput experiments. Journal: J.Bioinformatics Comput.Biol. Volume: 14 Issue: 6 DOI: Conference WEBURLS
  • Authors: Nguyen,V.K.; Klawonn,F.; Mikolajczyk,R.; Hernandez-Vargas,E.A.; ( Year: 2016). Title: Analysis of practical identifiability of a viral infection model. Journal: PLoS ONE Volume: 11 Issue: 12, S-Page: e0167568 DOI: Article PubMed
  • Authors: Düvel,J.; Bense,S.; Möller,S.; Bertinetti,D.; Schwede,F.; Morr,M.; Eckweiler,D.; Genieser,H.G.; Jänsch,L.; Herberg,F.W.; Frank,R.; Häußler,S.; ( Year: 2016). Title: Application of synthetic peptide arrays to uncover cyclic Di-GMP binding motifs. Journal: J Bacteriol. Volume: 198, S-Page: 138- E-Page: 146 DOI: 10.1128/JB.00377-15 HZI repository PubMed
  • Authors: Kortum,Xiaowei; Grigull,Lorenz; Muecke,Urs; Lechner,Werner; Klawonn,Frank; ( Year: 2016). Title: Diagnosis support for orphan diseases - a case study using a classifier fusion method. Book Title: Intelligent Data Engineering and Automated Learning - IDEAL 2016 Editors: Yin,H.; Gao,Y.; Li,B.; Zhang,D.; Yang,M.; Li,Y.; Klawonn,Frank; Tallón-Ballesteros,A.J.; (Ed.). City: Cham Publisher: Springer, S-Page: 379- E-Page: 385 ISBN: 978-3-319-46256-1 (ISBN) DOI: 10.1007/978-3-319-46257-8
  • Authors: Grigull,L.; Lechner,W.; Petri,S.; Kollewe,K.; Dengler,R.; Mehmecke,S.; Schumacher,U.; Lucke,T.; Schneider-Gold,C.; Kohler,C.; Guttsches,A.K.; Kortum,X.; Klawonn,F.; ( Year: 2016). Title: Diagnostic support for selected neuromuscular diseases using answer-pattern recognition and data mining techniques: a proof of concept multicenter prospective trial. Journal: BMC Med.Inform.Decis.Mak. Volume: 16 Issue: 1, S-Page: 31 DOI: 10.1186/s12911-016-0268-5 HZI repository PubMed
  • Authors: Klawonn,F.; ( Year: 2016). Title: Exploring Data Sets for Clusters and Validating Single Clusters. Journal: Procedia Computer Science Volume: 96, S-Page: 1381- E-Page: 1390
  • Authors: Kayser,H.; Nimtz,M.; ( Year: 2016). Title: Farnesyl biliverdins IXa are novel ligands of biliproteins from moths of the Noctuoidea superfamily: A chemosystematic view of the Lepidoptera. Journal: Insect Biochem.Mol.Biol. Volume: 78, S-Page: 12- E-Page: 19 DOI: Article WEBURLS
  • Authors: Thumfart,J.O.; Abidi,N.; Mindt,S.; Costina,V.; Hofheinz,R.; Klawonn,F.; Neumaier,M.; Findeisen,P.; ( Year: 2016). Title: LC/MS based monitoring of endogenous decay markers for quality assessment of serum specimens. Journal: J Proteomics Bioinform Volume: 8 Issue: 5, S-Page: 091- E-Page: 097 DOI: 10.4172/jpb.1000356 HZI repository PubMed
  • Authors: Kummer,A.; Nishanth,G.; Koschel,J.; Klawonn,F.; Schluter,D.; Jänsch,L.; ( Year: 2016). Title: Listeriosis down-regulates hepatic cytochrome P450 enzymes in sub-lethal murine infection. Journal: Proteomics Clin.Appl. Volume: 10, S-Page: 1025- E-Page: 1035 PubMed
  • Authors: Seeger,B.; Klawonn,F.; Nguema,Bekale B.; Steinberg,P.; ( Year: 2016). Title: Mixture Effects of Estrogenic Pesticides at the Human Estrogen Receptor alpha and beta. Journal: PLoS ONE Volume: 11 Issue: 1, S-Page: e0147490 DOI: 10.1371/journal.pone.0147490 HZI repository PubMed
  • Authors: Gangula,S.; Nimtz,M.; Mischnick,P.; ( Year: 2016). Title: Relative ion intensities of maltooligosaccharide ethers in electrospray ionization ion trap mass spectrometry: A quantitative evaluation. Journal: Int.J.Mass Spectrom. Volume: 402, S-Page: 57- E-Page: 65 DOI: 10.1016/j.ijms.2016.01.009 WEBURLS
  • Authors: Hartmann,T.; Schrapers,P.; Utesch,T.; Nimtz,M.; Rippers,Y.; Dau,H.; Mroginski,M.A.; Haumann,M.; Leimkühler,S.; ( Year: 2016). Title: The Molybdenum Active Site of Formate Dehydrogenase Is Capable of Catalyzing C-H Bond Cleavage and Oxygen Atom Transfer Reactions. Journal: Biochemistry Volume: 55 Issue: 16, S-Page: 2381- E-Page: 2389 DOI: 10.1021/acs.biochem.6b00002 HZI repository PubMed
  • Authors: Borrero-de Acuna,J.M.; Rohde,M.; Wissing,J.; Jänsch,L.; Schobert,M.; Molinari,G.; Timmis,K.N.; Jahn,M.; Jahn,D.; ( Year: 2016). Title: The Protein Network of the Pseudomonas aeruginosa Denitrification Apparatus. Journal: J Bacteriol. Volume: 198 Issue: 9, S-Page: 1401- E-Page: 1413 DOI: 10.1128/JB.00055-16 HZI repository PubMed
  • Authors: Khaledi,A.; Schniederjans,M.; Pohl,S.; Rainer,R.; Bodenhofer,U.; Xia,B.; Klawonn,F.; Bruchmann,S.; Preusse,M.; Eckweiler,D.; Dötsch,A.; Häußler,S.; ( Year: 2016). Title: Transcriptome profiling of antimicrobial resistance in Pseudomonas aeruginosa. Journal: Antimicrobial Agents Chemother. Volume: 60 Issue: 8, S-Page: 4722- E-Page: 4733 DOI: 10.1128/AAC.00075-16 PubMed
  • Authors: Omar,M.; Klawonn,F.; Brand,S.; Stiesch,M.; Krettek,C.; Eberhard,J.; ( Year: 2016). Title: Transcriptome-Wide High-Density Microarray Analysis Reveals Differential Gene Transcription in Periprosthetic Tissue From Hips With Chronic Periprosthetic Joint Infection vs Aseptic Loosening. Journal: J Arthroplasty Volume: 32, S-Page: 234- E-Page: 240 PubMed
  • Authors: Kayser,H.; Nimtz,M.; Ringler,P.; Müller,S.A.; ( Year: 2016). Title: Very high-density lipoprotein and vitellin as carriers of novel biliverdins IXalpha with a farnesyl side-chain presumably derived from heme A in Spodoptera littoralis. Journal: Insect Biochem.Mol.Biol. Volume: 68, S-Page: 41- E-Page: 51 DOI: 10.1016/j.ibmb.2015.10.017 HZI repository PubMed
  • Authors: Lee,C.; Wigren,E.; Trcek,J.; Peters,V.; Kim,J.; Hasni,M.S.; Nimtz,M.; Lindqvist,Y.; Park,C.; Curth,U.; Lünsdorf,H.; Römling,U.; ( Year: 2015). Title: A novel protein quality control mechanism contributes to heat shock resistance of world-wide distributed Pseudomonas aeruginosa clone C strains. Journal: Environmental Microbiology Volume: 17, S-Page: 4511- E-Page: 4526 DOI: 10.1111/1462-2920.12915 HZI repository PubMed
  • Authors: Borrero-de Acuna,J.M.; Molinari,G.; Rohde,M.; Dammeyer,T.; Wissing,J.; Jänsch,L.; Arias,S.; Jahn,M.; Schobert,M.; Timmis,K.N.; Jahn,D.; ( Year: 2015). Title: A periplasmic complex of the nitrite reductase NirS, the chaperone DnaK, and the flagellum protein FliC is essential for flagellum assembly and motility in Pseudomonas aeruginosa. Journal: Journal of Bacteriology Volume: 197 Issue: 19, S-Page: 3066- E-Page: 3075 DOI: 10.1128/JB.00415-15 HZI repository PubMed
  • Authors: Linke,D.; Leonhardt,R.; Eisele,N.; Petersen,L.M.; Riemer,S.; Nimtz,M.; Berger,R.G.; ( Year: 2015). Title: Carotene-degrading activities from Bjerkandera adusta possess an application in detergent industries. Journal: Bioprocess.Biosyst.Eng Volume: 38 Issue: 6, S-Page: 1191- E-Page: 1199 PubMed
  • Authors: Rother,A.K.; Schwerk,N.; Brinkmann,F.; Klawonn,F.; Lechner,W.; Grigull,L.; ( Year: 2015). Title: Diagnostic Support for Selected Paediatric Pulmonary Diseases Using Answer-Pattern Recognition in Questionnaires Based on Combined Data Mining Applications-A Monocentric Observational Pilot Study. Journal: PLoS ONE Volume: 10 Issue: 8, S-Page: e0135180 DOI: 10.1371/journal.pone.0135180 HZI repository PubMed
  • Authors: Ringel,P.; Probst,C.; Dammeyer,T.; Buchmeier,S.; Jänsch,L.; Wissing,J.; Tinnefeld,P.; Mendel,R.R.; Jockusch,B.M.; Kruse,T.; ( Year: 2015). Title: Enzymatic characterization of recombinant nitrate reductase expressed and purified from Neurospora crassa. Journal: Fungal Genetics and Biology Volume: 80, S-Page: 10- E-Page: 18 PubMed
  • Authors: Klawonn,F.; Kruse,R.; Winkler,R.; ( Year: 2015). Title: Fuzzy clustering: More than just fuzzification. Journal: Fuzzy Sets Syst Volume: 281, S-Page: 272- E-Page: 279 DOI: 10.1016/j.fss.2015.06.024 HZI repository PubMed
  • Authors: Preusse,M.; Schughart,K.; Wilk,E.; Klawonn,F.; Pessler,F.; ( Year: 2015). Title: Hematological parameters in the early phase of influenza A virus infection in differentially susceptible inbred mouse strains Infectious Diseases. Journal: BMC Res.Notes Volume: 8 Issue: 1, S-Page: Article number 225 DOI: 10.1186/s13104-015-1195-8 WEBURLS
  • Authors: Szafranski,S.P.; Wos-Oxley,M.L.; Vilchez-Vargas,R.; Jauregui,R.; Plumeier,I.; Klawonn,F.; Tomasch,J.; Meisinger,C.; Kühnisch,J.; Sztajer,H.; Pieper,D.H.; Wagner-Döbler,I.; ( Year: 2015). Title: High-resolution taxonomic profiling of the subgingival microbiome for biomarker discovery and periodontitis diagnosis. Journal: Appl.Environ.Microbiol. Volume: 81 Issue: 3, S-Page: 1047- E-Page: 1058 DOI: 10.1128/AEM.03534-14 HZI repository PubMed
  • Authors: König,J.; Grigull,L.; Fritsch,H.-W.; Klawonn,F.; ( Year: 2015). Title: IT-Unterstützung zur Diagnosefindung seltener Erkrankungen - Umfassende Datenanalyse bei komplexen Fällen. Journal: Der Klinikarzt Volume: 44, S-Page: 16- E-Page: 21
  • Authors: Wirsing,L.; Klawonn,F.; Sassen,W.A.; Lünsdorf,H.; Probst,C.; Hust,M.; Mendel,R.R.; Kruse,T.; Jänsch,L.; ( Year: 2015). Title: Linear Discriminant Analysis Identifies Mitochondrially Localized Proteins in Neurospora crassa. Journal: J Proteome.Res Volume: 14 Issue: 9, S-Page: 3900- E-Page: 3911 PubMed
  • Authors: Worthmann,H.; Tryc,A.B.; Dirks,M.; Schuppner,R.; Brand,K.; Klawonn,F.; Lichtinghagen,R.; Weissenborn,K.; ( Year: 2015). Title: Lipopolysaccharide binding protein, interleukin-10, interleukin-6 and C-reactive protein blood levels in acute ischemic stroke patients with post-stroke infection. Journal: J.Neuroinflamm. Volume: 12 Issue: 1 DOI: 10.1186/s12974-014-0231-2 HZI repository PubMed
  • Authors: Lanfermann,I.; Linke,D.; Nimtz,M.; Berger,R.G.; ( Year: 2015). Title: Manganese Peroxidases from Ganoderma applanatum Degrade beta-Carotene Under Alkaline Conditions. Journal: Appl.Biochem.Biotechnol. Volume: 175 Issue: 8, S-Page: 3800- E-Page: 3812 PubMed
  • Authors: Novoselova,N.; Wang,J.; Klawonn,F.; ( Year: 2015). Title: Optimized leaf ordering with class labels for hierarchical clustering. Journal: J.Bioinformatics Comput.Biol. Volume: 13 Issue: 4, S-Page: Article number 1550012 WEBURLS
  • Authors: Schweitzer,A.; Della,Beffa C.; Akmatov,M.K.; Narchi,H.; Abaev,Y.K.; Sherry,D.D.; Pessler,F.; ( Year: 2015). Title: Primary Osteomyelitis of the Sternum in the Pediatric Age Group: Report of a New Case and Comprehensive Analysis of Seventy-four Cases. Journal: Pediatr.Infect.Dis.J Volume: 34 Issue: 4, S-Page: e92- E-Page: e101 PubMed
  • Authors: Winkler,R.; Klawonn,F.; Kruse,R.; ( Year: 2015). Title: Prototype based fuzzy clustering algorithms in high-dimendional features spaces. Journal: Studies in Fuzzines and Soft Computing Volume: 322, S-Page: 233- E-Page: 243
  • Authors: Rand,U.; Riedel,J.; Hillebrand,U.; Shin,D.; Willenberg,S.; Behme,S.; Klawonn,F.; Köster,M.; Hauser,H.; Wirth,D.; ( Year: 2015). Title: Single-cell analysis reveals heterogeneity in onset of transgene expression from synthetic tetracycline-dependent promoters. Journal: Biotechnol.J. Volume: 10 Issue: 2, S-Page: 323- E-Page: 331 WEBURLS
  • Authors: Seeger,B.; Klawonn,F.; Bekale,B.N.; Steinberg,P.; ( Year: 2015). Title: The ability of the YAS and AR CALUX assays to detect the additive effects of anti-androgenic fungicide mixtures. Journal: Toxicol.Lett. Volume: 241, S-Page: 193- E-Page: 199 PubMed
  • Authors: Castelle,C.J.; Roger,M.; Bauzan,M.; Brugna,M.; Lignon,S.; Nimtz,M.; Golyshina,O.V.; Giudici-Orticoni,M.T.; Guiral,M.; ( Year: 2015). Title: The aerobic respiratory chain of the acidophilic archaeon Ferroplasma acidiphilum: A membrane-bound complex oxidizing ferrous iron. Journal: Biochim.Biophys.Acta Volume: 1847 Issue: 8, S-Page: 717- E-Page: 728 PubMed
  • Authors: Altun,M.; Walter,T.S.; Kramer,H.B.; Herr,P.; Iphöfer,A.; Boström,J.; David,Y.; Komsany,A.; Ternette,N.; Navon,A.; Stuart,D.I.; Ren,J.; Kessler,B.M.; ( Year: 2015). Title: The human otubain2-ubiquitin structure provides insights into the cleavage specificity of poly-ubiquitin-linkages. Journal: PLoS ONE Volume: 10 Issue: 1, S-Page: e0115344 DOI: 10.1371/journal.pone.0115344 HZI repository PubMed
  • Authors: Wu,Ching-Fang; Andzinski,Lisa; Kasnitz,Nadine; Kröger,Andrea; Klawonn,Frank; Lienenklaus,Stefan; Weiss,Siegfried; Jablonska,Jadwiga; ( Year: 2015). Title: The lack of type I interferon induces neutrophil-mediated pre-metastatic niche formation in the mouse lung. Journal: International Journal of Cancer Volume: 137, S-Page: 837- E-Page: 847 PubMed
  • Authors: Casilag,F.; Lorenz,A.; Kruger,J.; Klawonn,F.; Weiss,S.; Häußler,S.; ( Year: 2015). Title: The LasB elastase of Pseudomonas aeruginosa acts in concert with alkaline protease AprA to prevent flagellin-mediated immune recognition. Journal: Infection and Immunity Volume: 84, S-Page: 162- E-Page: 171 PubMed
  • Authors: Zhang,X.; Klawonn,F.; Grigull,L.; Lechner,W.; ( Year: 2015). Title: VoQs: A web application for visualization of questionnaire surveys. Journal: Lecture Notes in Computer Science Volume: 9385, S-Page: 334- E-Page: 343
  • Authors: Klawonn,F.; Höppner,F.; Jayaram,B.; ( Year: 2015). Title: What are clusters in high dimensions and are they difficult to find?. Journal: Lecture Notes in Computer Science Volume: 7627, S-Page: 14- E-Page: 33
  • Authors: Nieter,A.; Haase-Aschoff,P.; Linke,D.; Nimtz,Manfred; Berger,R.G.; ( Year: 2014). Title: A halotolerant type A feruloyl esterase from Pleurotus eryngii. Journal: Fungal Biology Volume: 118 Issue: 3, S-Page: 348- E-Page: 357 PubMed
  • Authors: Linke,D.; Lehnert,N.; Nimtz,Manfred; Berger,R.G.; ( Year: 2014). Title: An alcohol oxidase of Phanerochaete chrysosporium with a distinct glycerol oxidase activity. Journal: Enzyme Microbial Technology Volume: 61-62, S-Page: 7- E-Page: 12 PubMed
  • Authors: Niggemann,Jutta; Bozko,P.; Bruns,Nicole; Wodtke,Anne; Gieseler,M.T.; Thomas,K.; Jahns,C.; Nimtz,Manfred; Reupke,I.; Brüser,T.; Auling,G.; Malek,N.; Kalesse,Markus; ( Year: 2014). Title: Baceridin, a cyclic hexapeptide from an epiphytic bacillus strain, inhibits the proteasome. Journal: ChemBioChem Volume: 15 Issue: 7, S-Page: 1021- E-Page: 1029 WEBURLS
  • Authors: Bui,T.H.; Wray,Victor; Nimtz,Manfred; Fossen,T.; Preisitsch,M.; Schröder,G.; Wende,K.; Heiden,S.E.; Mundt,S.; ( Year: 2014). Title: Balticidins A-D, antifungal hassallidin-like lipopeptides from the Baltic Sea cyanobacterium Anabaena cylindrica Bio33. Journal: Journal of Natural Products Volume: 77 Issue: 6, S-Page: 1287- E-Page: 1296 WEBURLS
  • Authors: Sztajer,H.; Szafranski,S.P.; Tomasch,Jürgen; Reck,Michael; Nimtz,Manfred; Rohde,Manfred; Wagner-Döbler,Irene; ( Year: 2014). Title: Cross-feeding and interkingdom communication in dual-species biofilms of Streptococcus mutans and Candida albicans. Journal: ISME Journal Volume: 8 Issue: 11, S-Page: 2256- E-Page: 2271 DOI: 10.1038/ismej.2014.73 HZI repository PubMed
  • Authors: Ince,K.; Klawonn,Frank; ( Year: 2014). Title: Decision and regression trees in the context of attributes with different granularity levels. Journal: Studies in Fuzziness and Soft Computing Volume: 285, S-Page: 331- E-Page: 342
  • Authors: Vanz,A.L.; Nimtz,Manfred; Rinas,Ursula; ( Year: 2014). Title: Decrease of UPR- and ERAD-related proteins in Pichia pastoris during methanol-induced secretory insulin precursor production in controlled fed-batch cultures. Journal: Microbial Cell Factories Volume: 13 Issue: 1, S-Page: art.no. 23 DOI: 10.1186/1475-2859-13-23 HZI repository PubMed
  • Authors: Milanez-Almeida,P.; Klawonn,F.; Meyer-Hermann,M.; Hühn,J.; ( Year: 2014). Title: Differential control of immune cell homeostasis by Foxp3(+) regulatory T cells in murine peripheral lymph nodes and spleen. Journal: Eur.J Microbiol.Immunol.(Bp) Volume: 4 Issue: 3, S-Page: 147- E-Page: 155 PubMed
  • Authors: Kleine-Ostmann,T.; Jastrow,C.; Baaske,K.; Heinen,B.; Schwerdtfeger,M.; Kärst,Uwe; Hintzsche,H.; Stopper,H.; Koch,M.; Schrader,T.; ( Year: 2014). Title: Field exposure and dosimetry in the thz frequency range. Journal: IEEE Transactions on Terahertz Science and Technology Volume: 4 Issue: 1, S-Page: 12- E-Page: 25 WEBURLS
  • Authors: Probst,C.; Ringel,P.; Boysen,V.; Wirsing,Lisette; Alexander,M.M.; Mendel,R.R.; Kruse,T.; ( Year: 2014). Title: Genetic characterization of the Neurospora crassa molybdenum cofactor biosynthesis. Journal: Fungal Genetics and Biology Volume: 66, S-Page: 69- E-Page: 78 PubMed
  • Authors: Ince,K.; Klawonn,Frank; ( Year: 2014). Title: Handling different levels of granularity within naive Bayes classifiers. Journal: Lecture Notes in Computer Science Volume: 8206 LNCS, S-Page: 521- E-Page: 528
  • Authors: Tschumitschew,K.; Klawonn,Frank; ( Year: 2014). Title: High against low quantile comparison for biomarker and classifier evalution. Journal: Lecture Notes in Computer Science Volume: 8206 LNCS, S-Page: 561- E-Page: 568
  • Authors: Shevchuk,Olga; Abidi,Nada; Klawonn,Frank; Wissing,Josef; Nimtz,Manfred; Kugler,C.; Steinert,M.; Goldmann,T.; Jänsch,Lothar; ( Year: 2014). Title: HOPE-fixation of lung tissue allows retrospective proteome and phosphoproteome studies. Journal: Journal of Proteome Research Volume: 13 Issue: 11, S-Page: 5230- E-Page: 5239 WEBURLS
  • Authors: Novoselova,N.; Della,Beffa Cristina; Wang,Junxi; Li,J.; Pessler,Frank; Klawonn,Frank; ( Year: 2014). Title: HUM calculator and HUM package for R: easy-to-use software tools for multicategory receiver operating characteristic analysis. Journal: Bioinformatics Volume: 30 Issue: 11, S-Page: 1635- E-Page: 1636 PubMed
  • Authors: Jäger,J.; Marwitz,S.; Tiefenau,J.; Rasch,J.; Shevchuk,Olga; Kugler,C.; Goldmann,T.; Steinert,M.; ( Year: 2014). Title: Human lung tissue explants reveal novel interactions during Legionella pneumophila infections. Journal: Infection and Immunity Volume: 82 Issue: 1, S-Page: 275- E-Page: 285 DOI: 10.1128/IAI.00703-13 HZI repository PubMed
  • Authors: Magnowska,Z.; Hartmann,I.; Jänsch,Lothar; Jahn,D.; ( Year: 2014). Title: Membrane Proteomics of Pseudomonas aeruginosa. Journal: Methods in Molecular Biology Volume: 1149, S-Page: 213- E-Page: 224 PubMed
  • Authors: Montvida,O.; Klawonn,Frank; ( Year: 2014). Title: Relative cost curves: An alternative to AUC and an extension to 3-class problems. Journal: Kybernetika Volume: 50 Issue: 5, S-Page: 647- E-Page: 660 WEBURLS
  • Authors: Kayser,H.; Wray,Victor; Nimtz,Manfred; ( Year: 2014). Title: Structure of a novel farnesylated bilin from an insect - Formation by ?-cleavage of heme A of mitochondrial cytochrome c oxidases?. Journal: FEBS Journal Volume: 281 Issue: 10, S-Page: 2366- E-Page: 2376 DOI: 10.1111/febs.12789 HZI repository PubMed
  • Authors: Schreiber,L.; Pietzsch,Beate; Flöß,Stefan; Farah,Carla; Jänsch,Lothar; Schmitz,Ingo; Hühn,Jochen; ( Year: 2014). Title: The Treg-specific demethylated region stabilizes Foxp3 expression independently of NF-?B signaling. Journal: PLoS ONE Volume: 9 Issue: 2, S-Page: e88318 WEBURLS
  • Authors: Wuestefeld,T.; Pesic,M.; Rudalska,R.; Dauch,D.; Longerich,T.; Kang,T.W.; Yevsa,T.; Heinzmann,F.; Hoenicke,L.; Hohmeyer,A.; Potapova,A.; Rittelmeier,I.; Jarek,Michael; Geffers,Robert; Scharfe,Maren; Klawonn,Frank; Schirmacher,P.; Malek,N.P.; Ott,M.; Nordheim,A.; Vogel,A.; Manns,M.P.; Zender,L.; ( Year: 2013). Title: A direct in vivo RNAi screen identifies MKK4 as a key regulator of liver regeneration. Journal: Cell Volume: 153 Issue: 2, S-Page: 389- E-Page: 401 WEBURLS
  • Authors: Elsaman,A.M.; Radwan,A.R.; Akmatov,M.K.; Della,Beffa C.; Walker,A.; Mayer,C.T.; Dai,L.; Nativ,S.; Rygg,M.; Atsali,E.; Saijo,K.; Ogdie,A.R.; Srinivasulu,N.; Fathi,N.; Schumacher,H.R.; Pessler,F.; ( Year: 2013). Title: Amyloid arthropathy associated with multiple myeloma: A systematic analysis of 101 reported cases. Journal: Seminars in Arthritis and Rheumatism Volume: 43 Issue: 3, S-Page: 405- E-Page: 412 WEBURLS
  • Authors: Haase-Aschoff,P.; Linke,D.; Nimtz,Manfred; Popper,L.; Berger,R.G.; ( Year: 2013). Title: An enzyme from Auricularia auricula-judae combining both benzoyl and cinnamoyl esterase activity. Journal: Process Biochemistry Volume: 48 Issue: 12, S-Page: 1872- E-Page: 1878 DOI: 10.1016/j.procbio.2013.09.016 HZI repository PubMed
  • Authors: Klawonn,Frank; Jayaram,B.; Crull,Katja; Kukita,A.; Pessler,Frank; ( Year: 2013). Title: Analysis of contingency tables based on generalized median polish with power transformations and non-additive models. Journal: Health Information Science & Systems Volume: 1, S-Page: 11
  • Authors: Jayaram,B.; Klawonn,Frank; ( Year: 2013). Title: Can fuzzy clustering avoid local minima and undesired partitions?. Journal: Studies in Computational Intelligence Volume: 445, S-Page: 31- E-Page: 44
  • Authors: Klawonn,Frank; ( Year: 2013). Title: Case-centred multidimensional scaling for classification visualisation in medical diagnosis. Journal: LNCS Volume: 7798, S-Page: 137- E-Page: 148 DOI: 10.1007/978-3-642-37899-7_12 HZI repository
  • Authors: Tschumitschew,K.; Klawonn,Frank; ( Year: 2013). Title: Change Detection Based on the Distribution of p-Values. Book Title: Towards Advanced Data Analysis by Combining Soft Computing and Statistics Editors: Borgelt,C.; Gil,M.A.; Sousa,J.M.C.; Verleysen,M.; (Ed.). City: Berlin Publisher: Springer, S-Page: 191- E-Page: 203 ISBN: 978-3-642-30277-0 (ISBN) DOI: 10.1007/978-3-642-30278-7_16
  • Authors: Jayaram,B.; Klawonn,Frank; ( Year: 2013). Title: Generalised median Polish based on additive generators. Journal: Advances in Intelligent Systems and Computing Volume: 190 AISC, S-Page: 439- E-Page: 448
  • Authors: Preusse,Matthias; Tantawy,M.A.; Klawonn,Frank; Schughart,Klaus; Pessler,Frank; ( Year: 2013). Title: Infection- and procedure-dependent effects on pulmonary gene expression in the early phase of influenza A virus infection in mice. Journal: BMC Microbiology Volume: 13 Issue: 1, S-Page: art.no. 293 WEBURLS
  • Authors: Kaba,H.E.; Nimtz,Manfred; Müller,Peter P.; Bilitewski,Ursula; ( Year: 2013). Title: Involvement of the mitogen activated protein kinase Hog1p in the response of Candida albicans to iron availability. Journal: BMC Microbiology Volume: 13, S-Page: 16 DOI: 10.1186/1471-2180-13-16 HZI repository PubMed
  • Authors: Nicke,T.; Schnitzer,T.; Münch,K.; Adamczack,J.; Haufschildt,K.; Buchmeier,S.; Kucklick,M.; Felgenträger,Undine; Jänsch,Lothar; Riedel,K.; Layer,G.; ( Year: 2013). Title: Maturation of the cytochrome cd1 nitrite reductase NirS from Pseudomonas aeruginosa requires transient interactions between the three proteins NirS, NirN and NirF. Journal: Bioscience Reports Volume: 33 Issue: 3, S-Page: 529- E-Page: 539 DOI: 10.1042/BSR20130043 HZI repository PubMed
  • Authors: Gamrekelashvili,J.; Kapanadze,T.; Han,M.; Wissing,J.; Ma,C.; Jänsch,Lothar; Manns,M.P.; Armstrong,T.; Jaffee,E.; White,A.O.; Citrin,D.E.; Korangy,F.; Greten,T.F.; ( Year: 2013). Title: Peptidases released by necrotic cells control CD8+ T cell cross-priming. Journal: Journal of Clinical Investigation Volume: 123 Issue: 11, S-Page: 4755- E-Page: 4768 DOI: 10.1172/JCI65698 HZI repository PubMed
  • Authors: Zelena,K.; Takenberg,M.; Lunkenbein,S.; Woche,S.K.; Nimtz,Manfred; Berger,R.G.; ( Year: 2013). Title: PfaH2: A novel hydrophobin from the ascomycete Paecilomyces farinosus. Journal: Biotechnology and Applied Biochemistry Volume: 60 Issue: 2, S-Page: 147- E-Page: 154 DOI: 10.1002/bab.1077 HZI repository PubMed
  • Authors: Scheiter,Maxi; Bulitta,Björn; van,Ham Marco; Klawonn,Frank; Konig,S.; Jänsch,Lothar; ( Year: 2013). Title: Protein Kinase Inhibitors CK59 and CID755673 Alter Primary Human NK Cell Effector Functions. Journal: Frontiers in Immunology Volume: 4, S-Page: 66 DOI: 10.3389/fimmu.2013.00066 HZI repository PubMed
  • Authors: Scheiter,Maxi; Lau,Ulrike; van,Ham Marco; Bulitta,Björn; Gröbe,Lothar; Garritsen,H.; Klawonn,Frank; Konig,S.; Jänsch,Lothar; ( Year: 2013). Title: Proteome analysis of distinct developmental stages of human natural killer (NK) cells. Journal: Molecular and Cellular Proteomics Volume: 12 Issue: 5, S-Page: 1099- E-Page: 1114 DOI: 10.1074/mcp.M112.024596 HZI repository PubMed
  • Authors: Tielen,P.; Rosin,N.; Meyer,A.K.; Dohnt,K.; Haddad,I.; Jänsch,Lothar; Klein,J.; Narten,M.; Pommerenke,C.; Scheer,M.; Schobert,M.; Schomburg,D.; Thielen,B.; Jahn,D.; ( Year: 2013). Title: Regulatory and Metabolic Networks for the Adaptation of Pseudomonas aeruginosa Biofilms to Urinary Tract-Like Conditions. Journal: PLoS ONE Volume: 8 Issue: 8, S-Page: e71845 DOI: 10.1371/journal.pone.0071845 HZI repository PubMed
  • Authors: Hintzsche,H.; Jastrow,C.; Heinen,B.; Baaske,K.; Kleine-Ostmann,T.; Schwerdtfeger,M.; Shakfa,M.K.; Kärst,Uwe; Koch,M.; Schrader,T.; Stopper,H.; ( Year: 2013). Title: Terahertz Radiation at 0.380 THz and 2.520 THz Does Not Lead to DNA Damage in Skin Cells In Vitro. Journal: Radiation Research Volume: 179 Issue: 1, S-Page: 38- E-Page: 45 PubMed
  • Authors: Bodenhofer,U.; Krone,M.; Klawonn,Frank; ( Year: 2013). Title: Testing noisy numerical data for monotonic association. Journal: Information Sciences Volume: 245, S-Page: 21- E-Page: 37 DOI: 10.1016/j.ins.2012.11.026 HZI repository PubMed
  • Authors: Pustelny,C.; Brouwer,S.; Musken,M.; Bielecka,A.; Dotsch,A.; Nimtz,Manfred; Häußler,Susanne; ( Year: 2013). Title: The peptide chain release factor methyltransferase PrmC is essential for pathogenicity and environmental adaptation of Pseudomonas aeruginosa PA14. Journal: Environmental Microbiology Volume: 15 Issue: 2, S-Page: 597- E-Page: 609 DOI: 10.1111/1462-2920.12040 HZI repository PubMed
  • Authors: Della Beffa,Cristina; Slansky,E.; Pommerenke,C.; Klawonn,Frank; Li,J.; Dai,L.; Schumacher,H.R.,Jr.; Pessler,Frank; ( Year: 2013). Title: The relative composition of the inflammatory infiltrate as an additional tool for synovial tissue classification. Journal: PLoS ONE Volume: 8 Issue: 8, S-Page: e72494 DOI: 10.1371/journal.pone.0072494 HZI repository PubMed
  • Authors: Dahl,J.U.; Radon,C.; Buhning,M.; Nimtz,Manfred; Leichert,L.I.; Denis,Y.; Jourlin-Castelli,C.; Iobbi-Nivol,C.; Mejean,V.; Leimkuhler,S.; ( Year: 2013). Title: The sulfur carrier protein TusA has a pleiotropic role in Escherichia coli that also affects molybdenum cofactor biosynthesis. Journal: Journal of Biological Chemistry Volume: 288 Issue: 8, S-Page: 5426- E-Page: 5442 DOI: 10.1074/jbc.M112.431569 HZI repository PubMed
  • Authors: Abidi,N.; Klawonn,Frank; Thumfart,J.O.; ( Year: 2013). Title: Time point estimation of a single sample from high throughput experiments based on time-resolved data and robust correlation measures. Journal: LNCS (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)) Volume: 8207, S-Page: 32- E-Page: 43
  • Authors: Klawonn,F.; ( Year: 2013). Title: What can fuzzy cluster analysis contribute to clustering of high-dimensional data?. Journal: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Volume: 8256 LNAI, S-Page: 1- E-Page: 14
  • Authors: Düvel,J.; Bertinetti,D.; Moller,S.; Schwede,F.; Morr,M.; Wissing,J.; Radamm,L.; Zimmermann,B.; Genieser,H.G.; Jänsch,Lothar; Herberg,F.W.; Häußler,Susanne; ( Year: 2012). Title: A chemical proteomics approach to identify c-di-GMP binding proteins in Pseudomonas aeruginosa. Journal: Journal of Microbiological Methods Volume: 88 Issue: 2, S-Page: 229- E-Page: 236 DOI: 10.1016/j.mimet.2011.11.015 PubMed
  • Authors: Pommerenke,C.; Friedrich,B.; Johl,T.; Jänsch,Lothar; Häußler,Susanne; Klawonn,F.; ( Year: 2012). Title: A modified apriori algorithm for analysing high-dimensional gene data. Journal: LNCS Volume: 6936, S-Page: 236- E-Page: 243
  • Authors: Winkler,R.; Kruse,R.; Klawonn,Frank; ( Year: 2012). Title: A New Distance Function for Fuzzy c-Means Clustering in High-Dimensional Spaces with Applications in S.O.D.A.. Book Title: Data Analysis Methods and its Applications Editors: Pociecha,J.; Decker,R.; (Ed.). City: Warszawa Publisher: Wydawnictwo C.H. Beck ISBN: 978-83-7252-578-9 (ISBN)
  • Authors: Linke,D.; Matthes,R.; Nimtz,Manfred; Zorn,H.; Bunzel,M.; Berger,R.G.; ( Year: 2012). Title: An esterase from the basidiomycete Pleurotus sapidus hydrolyzes feruloylated saccharides. Journal: Applied Microbiology and Biotechnology Volume: 97 Issue: 16, S-Page: 7241- E-Page: 7251 PubMed
  • Authors: Zaoui,C.; Overhage,J.; Lons,D.; Zimmermann,A.; Musken,M.; Bielecki,P.; Pustelny,C.; Becker,T.; Nimtz,Manfred; Häußler,Susanne; ( Year: 2012). Title: An orphan sensor kinase controls quinolone signal production via MexT in Pseudomonas aeruginosa. Journal: Molecular Microbiology Volume: 83 Issue: 3, S-Page: 536- E-Page: 547 PubMed
  • Authors: Jayaram,B.; Klawonn,Frank; ( Year: 2012). Title: Can unbounded distance measures mitigate the curse of dimensionality?. Journal: International Journal of Data Mining, Modelling and Management Volume: 4 Issue: 4, S-Page: 361- E-Page: 383 DOI: 10.1504/IJDMMM.2012.049883
  • Authors: Kumar,A.; Saini,S.; Wray,V.; Nimtz,Manfred; Prakash,A.; Johri,B.N.; ( Year: 2012). Title: Characterization of an antifungal compound produced by Bacillus sp. strain A(5) F that inhibits Sclerotinia sclerotiorum. Journal: Journal of Basic Microbiology Volume: 52 Issue: 6, S-Page: 670- E-Page: 678 DOI: 10.1002/jobm.201100463 PubMed
  • Authors: Hain,T.; Ghai,R.; Billion,A.; Kuenne,C.T.; Steinweg,C.; Izar,B.; Mohamed,W.; Mraheil,M.A.; Domann,E.; Schaffrath,S.; Kärst,Uwe; Goesmann,A.; Oehm,S.; Puhler,A.; Merkl,R.; Vorwerk,S.; Glaser,P.; Garrido,P.; Rusniok,C.; Buchrieser,C.; Goebel,W.; Chakraborty,T.; ( Year: 2012). Title: Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes. Journal: BMC GENOMICS Volume: 13, S-Page: 144 PubMed
  • Authors: Klawonn,F.; Abidi,N.; Berger,E.; Jänsch,Lothar*; ( Year: 2012). Title: Curve fitting for short time series data from high throughput experiments with correction for biological variation. Journal: Lecture Notes in Computer Science Volume: LNCS 7619, S-Page: 150- E-Page: 160
  • Authors: Johl,T.; Nimtz,Manfred; Jänsch,Lothar; Klawonn,Frank; ( Year: 2012). Title: Detecting glycosylations in complex samples. Journal: IFIP Advances in Information and Communication Technology Volume: 381 AICT (Part 1) Issue: 234, S-Page: 243
  • Authors: Nedelko,Tatiana; Kollmus,Heike; Klawonn,Frank; Spijker,S.; Lu,L.; Hessman,M.; Alberts,R.; Williams,R.W.; Schughart,Klaus; ( Year: 2012). Title: Distinct gene loci control the host response to influenza H1N1 virus infection in a time-dependent manner. Journal: BMC GENOMICS Volume: 13, S-Page: 411 DOI: 10.1186/1471-2164-13-411 HZI repository PubMed
  • Authors: König,S.; Probst-Kepper,M.; Reinl,T.; Jeron,A.; Hühn,Jochen; Schraven,B.; Jänsch,Lothar; ( Year: 2012). Title: First insight into the kinome of human regulatory T cells. Journal: PLoS ONE Volume: 7 Issue: 7, S-Page: e40896 DOI: 10.1371/journal.pone.0040896 HZI repository PubMed
  • Authors: Lehrke,M.; Rump,S.; Heidenreich,T.; Wissing,Josef; Mendel,R.R.; Bittner,F.; ( Year: 2012). Title: Identification of persulfide-binding and disulfide-forming cysteine residues in the NifS-like domain of the molybdenum cofactor sulfurase ABA3 by cysteine-scanning mutagenesis. Journal: Biochemistry Journal Volume: 441 Issue: 3, S-Page: 823- E-Page: 832 PubMed
  • Authors: Tschumitschew,K.; Klawonn,F.; ( Year: 2012). Title: Incremental statistical measures. Book Title: Learning in Non-Stationary Environments: Methods and Applications Publisher: Springer New York, S-Page: 21- E-Page: 55 ISBN: 9781441980205 (ISBN) 1441980199 (ISBN) 9781441980199 (ISBN) WEBURLS
  • Authors: König,S.; Nimtz,Manfred; Scheiter,M.; Ljunggren,H.G.; Bryceson,Y.T.; Jänsch,Lothar; ( Year: 2012). Title: Kinome analysis of receptor-induced phosphorylation in human natural killer cells. Journal: PLoS ONE Volume: 7 Issue: 1, S-Page: e29672 PubMed
  • Authors: Klawonn,Frank; Crull,Katja; Kukita,A.; Pessler,Frank; ( Year: 2012). Title: Median polish with power transformations as an alternative for the analysis of contingency tables with patient data. Journal: LNCS (Lecture Notes in Computer Sience (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)) Volume: 7231, S-Page: 25- E-Page: 35
  • Authors: Vanz,A.L.; Lünsdorf,H.; Adnan,A.; Nimtz,M.; Gurramkonda,C.; Khanna,N.; Rinas,U.; ( Year: 2012). Title: Physiological response of Pichia pastoris GS115 to methanol-induced high level production of the Hepatitis B surface antigen: catabolic adaptation, stress responses, and autophagic processes. Journal: Microbial Cell Factories Volume: 11, S-Page: 103 PubMed
  • Authors: Iphofer,A.; Kummer,A.; Nimtz,Manfred; Ritter,A.; Arnold,T.; Frank,R.; van den Heuvel,Joop; Kessler,B.M.; Jänsch,Lothar; Franke,R.; ( Year: 2012). Title: Profiling ubiquitin linkage specificities of deubiquitinating enzymes with branched ubiquitin isopeptide probes. Journal: ChemBioChem Volume: 13 Issue: 10, S-Page: 1416- E-Page: 1420 PubMed
  • Authors: Arendt,W.; Hebecker,S.; Jager,S.; Nimtz,Manfred; Moser,J.; ( Year: 2012). Title: Resistance phenotypes mediated by aminoacyl-phosphatidylglycerol synthases. Journal: Journal of Bacteriology Volume: 194 Issue: 6, S-Page: 1401- E-Page: 1416 PubMed
  • Authors: Grigull,L.; Betzel,C.; Schumacher,U.; Rother,A.-K.; Mücke,U.; Klawonn,F.; Lechner,W.M.; ( Year: 2012). Title: Should paediatricians use a computer to receive diagnostic support? [Sollten Kinderärzte zur Unterstützung bei der Diagnostik einen Computer nutzen?]. Journal: Pediatrische Praxis Volume: 79 Issue: 4, S-Page: 545- E-Page: 555
  • Authors: Gernert,C.; Klawonn,Frank; Jänsch,Lothar; ( Year: 2012). Title: SignalNet: Visualization of signal network responses by quantitative proteome data. Journal: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics Volume: 6936 LNCS, S-Page: 361- E-Page: 368
  • Authors: Klawonn,Frank; ( Year: 2012). Title: Significance tests to identify regulated proteins based on a large number of small samples. Journal: Kybernetika Volume: 48 Issue: 3, S-Page: 478- E-Page: 493
  • Authors: Gernert,C.; Berger,E.; Klawonn,F.; Jänsch,Lothar; ( Year: 2012). Title: Tackling misleading peptide regulation fold changes in quantitative proteomics. Journal: Advances in Intelligent and Soft Computing Volume: 154, S-Page: 269- E-Page: 276
  • Authors: Hintzsche,H.; Jastrow,C.; Kleine-Ostmann,T.; Kärst,Uwe; Schrader,T.; Stopper,H.; ( Year: 2012). Title: Terahertz Electromagnetic Fields (0.106 THz) Do Not Induce Manifest Genomic Damage In Vitro. Journal: PLoS ONE Volume: 7 Issue: 9, S-Page: e46397 DOI: 10.1371/journal.pone.0046397 HZI repository PubMed
  • Authors: von Zur,Muhlen C.; Schiffer,E.; Sackmann,C.; Zurbig,P.; Neudorfer,I.; Zirlik,A.; Htun,N.; Iphofer,A.; Jänsch,Lothar; Mischak,H.; Bode,C.; Chen,Y.C.; Peter,K.; ( Year: 2012). Title: Urine Proteome Analysis Reflects Atherosclerotic Disease in an ApoE-/- Mouse Model and Allows the Discovery of New Candidate Biomarkers in Mouse and Human Atherosclerosis. Journal: Molecular and Cellular Proteomics Volume: 11 Issue: 7, S-Page: M111 PubMed
  • Authors: Hebecker,S.; Arendt,W.; Heinemann,I.U.; Tiefenau,J.H.; Nimtz,Manfred*; Rohde,Manfred*; Soll,D.; Moser,J.; ( Year: 2011). Title: Alanyl-phosphatidylglycerol synthase: mechanism of substrate recognition during tRNA-dependent lipid modification in Pseudomonas aeruginosa. Journal: Molecular Microbiology Volume: 80 Issue: 4, S-Page: 935- E-Page: 950 PubMed
  • Authors: Klawonn,Frank*; Höppner,F.; May,S.; ( Year: 2011). Title: An alternative to ROC and AUC analysis of classifiers. Journal: LNCS (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)) Volume: 7014, S-Page: 210- E-Page: 221
  • Authors: Langlotz,C.; Schollmeyer,M.; Coplin,D.L.; Nimtz,Manfred*; Geider,K.; ( Year: 2011). Title: Biosynthesis of the repeating units of the exopolysaccarides amylovoran from Erwinia amylovora and stewartan from Pantoea stewartii. Journal: Physiological and Molecular Plant Pathology Volume: 75 Issue: 4, S-Page: 163- E-Page: 169 DOI: 10.1016/j.pmpp.2011.04.001 HZI repository PubMed
  • Authors: Lunkenbein,S.; Takenberg,M.; Nimtz,Manfred*; Berger,R.G.; ( Year: 2011). Title: Characterization of a hydrophobin of the ascomycete Paecilomyces farinosus. Journal: Journal of Basic Microbiology Volume: 51 Issue: 4, S-Page: 404- E-Page: 414 PubMed
  • Authors: Georgieva,O.; Tschumitschew,K.; Klawonn,Frank*; ( Year: 2011). Title: Cluster validity measures based on the minimum description length principle. Journal: Lecture Notes in Computer Science Volume: 6881 LNAI (part 1), S-Page: 82- E-Page: 89
  • Authors: Buchrieser,C.; Rusniok,C.; Garrido,P.; Hain,T.; Scortti,M.; Lampidis,R.; Kärst,Uwe*; Chakraborty,T.; Cossart,P.; Kreft,J.; Vazquez-Boland,J.A.; Goebel,W.; Glaser,P.; ( Year: 2011). Title: Complete genome sequence of the animal pathogen Listeria ivanovii, which provides insights into host specificities and evolution of the genus Listeria1. Journal: Journal of Bacteriology Volume: 193 Issue: 23, S-Page: 6787- E-Page: 6788 PubMed
  • Authors: Metzger,J.; Chatzikyrkou,C.; Broecker,V.; Schiffer,E.; Jänsch,Lothar*; Iphoefer,A.; Mengel,M.; Mullen,W.; Mischak,H.; Haller,H.; Gwinner,W.; ( Year: 2011). Title: Diagnosis of subclinical and clinical acute T-cell-mediated rejection in renal transplant patients by urinary proteome analysis. Journal: Proteomics -Clinical Applications Volume: 5 Issue: 5-6, S-Page: 322- E-Page: 333 DOI: 10.1002/prca.201000153 PubMed
  • Authors: Voss,M.; Nimtz,Manfred*; Leimkuhler,S.; ( Year: 2011). Title: Elucidation of the Dual Role of Mycobacterial MoeZR in Molybdenum Cofactor Biosynthesis and Cysteine Biosynthesis. Journal: PLoS ONE Volume: 6 Issue: 11, S-Page: e28170 DOI: 10.1371/journal.pone.0028170 HZI repository PubMed
  • Authors: Della Beffa,Cristina*; Klawonn,Frank*; Menetski,J.P.; Schumacher,H.R.; Pessler,Frank*; ( Year: 2011). Title: Evaluation of glyceraldehyde-3-phosphate, prolylpeptidyl isomerase A, and a set of stably expressed genes as reference mRNAs in urate crystal inflammation. Journal: BMC Research Notes Volume: 4, S-Page: 443 DOI: 10.1186/1756-0500-4-443 HZI repository
  • Authors: Winkler,R.; Klawonn,Frank*; Kruse,R.; ( Year: 2011). Title: Fuzzy clustering with polynomial fuzzifier function in connection with m-estimators. Journal: Applied and Computational Mathematics Volume: 10 Issue: 1, S-Page: 146- E-Page: 163
  • Authors: Bartsch,A.; Bunk,B.; Haddad,I.; Klein,J.; Munch,R.; Johl,T.; Karst,U.; Jänsch,Lothar*; Jahn,D.; Retter,I.; ( Year: 2011). Title: GeneReporter--sequence-based document retrieval and annotation. Journal: Bioinformatics Volume: 27 Issue: 7, S-Page: 1034- E-Page: 1035 DOI: 10.1093/bioinformatics/btr047 HZI repository PubMed
  • Authors: Eisele,N.; Linke,D.; Nimtz,Manfred*; Berger,R.G.; ( Year: 2011). Title: Heterologous expression, refolding and characterization of a salt activated subtilase from Pleurotus ostreatus. Journal: Process Biochemistry Volume: 46 Issue: 9, S-Page: 1840- E-Page: 1846
  • Authors: Hemmen,K.; Reinl,T.; Buttler,K.; Behler,F.; Dieken,H.; Jänsch,Lothar*; Wilting,J.; Weich,Herbert A.*; ( Year: 2011). Title: High-resolution mass spectrometric analysis of the secretome from mouse lung endothelial progenitor cells. Journal: Angiogenesis Volume: 14 Issue: 2, S-Page: 163- E-Page: 172 DOI: 10.1007/s10456-011-9200-x HZI repository PubMed
  • Authors: Krone,M.; Klawonn,Frank*; Lührs,Thorsten*; ( Year: 2011). Title: Identification of nuclear magnetic resonance signals via Gaussian mixture decomposition. Journal: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Volume: 7014 LNCS, S-Page: 234- E-Page: 245
  • Authors: Novoselova,N.; Klawonn,Frank*; Johl,T.; Reinl,T.; Jänsch,Lothar*; ( Year: 2011). Title: Identification of peptides with deviating regulation factors using a robust clustering scheme. Journal: Advances in Intelligent and Soft Computing Volume: 93, S-Page: 263- E-Page: 270
  • Authors: Eberl,L.; Riedel,Katharina*; ( Year: 2011). Title: Mining quorum sensing regulated proteins - role of bacterial cell-to-cell communication in global gene regulation as assessed by proteomics. Journal: Proteomics Volume: 11 Issue: 15, S-Page: 3070- E-Page: 3085
  • Authors: Babiychuk,E.; Vandepoele,K.; Wissing,J.; Garcia-Diaz,M.; De,Rycke R.; Akbari,H.; Joubes,J.; Beeckman,T.; Jänsch,Lothar*; Frentzen,M.; Van Montagu,M.C.; Kushnir,S.; ( Year: 2011). Title: Plastid gene expression and plant development require a plastidic protein of the mitochondrial transcription termination factor family. Journal: Proceedings of the National Academy of Sciences USA Volume: 108 Issue: 16, S-Page: 6674- E-Page: 6679 DOI: 10.1073/pnas.1103442108 PubMed
  • Authors: El-Baky,H.A.; Linke,D.; Nimtz,Manfred*; Berger,R.G.; ( Year: 2011). Title: PsoP1, a Milk-Clotting Aspartic Peptidase from the Basidiomycete Fungus Piptoporus soloniensis. Journal: Journal of Agricultural and Food Chemistry Volume: 59 Issue: 18, S-Page: 10311- E-Page: 10316 PubMed
  • Authors: Krone,M.; Klawonn,Frank*; ( Year: 2011). Title: Rank correlation coefficient correction by removing worst cases. Book Title: Information Processing and Management of Uncertainty in Knowledge-Based Systems: Theory and Methods Editors: Hüllermeier,E.; Kruse,R.; Hoffmann,F.; (Ed.). City: Berlin Publisher: Springer, S-Page: 356- E-Page: 364 ISBN: 978-364214054-9 (ISBN) DOI: 10.1007/978-3-642-14055-6_37 PubMed
  • Authors: Darpel,K.E.; Langner,K.F.; Nimtz,Manfred*; Anthony,S.J.; Brownlie,J.; Takamatsu,H.H.; Mellor,P.S.; Mertens,P.P.; ( Year: 2011). Title: Saliva proteins of vector culicoides modify structure and infectivity of bluetongue virus particles. Journal: PLoS ONE Volume: 6 Issue: 3, S-Page: e17545 DOI: 10.1371/journal.pone.0017545 HZI repository PubMed
  • Authors: Abd El-Baky,H.; Linke,D.; Nimtz,Manfred*; Metry,W.; El-Demerdash,O.; Berger,R.G.; ( Year: 2011). Title: The extracellular aspartic peptidase of basidiomycete Wolfiporia cocos is a highly efficient milk clotting enzyme. Journal: Milchwissenschaft Volume: 66 Issue: 4, S-Page: 406- E-Page: 409
  • Authors: Eisele,N.; Linke,D.; Bitzer,K.; Na'amnieh,S.; Nimtz,Manfred*; Berger,R.G.; ( Year: 2011). Title: The first characterized asparaginase from a basidiomycete, Flammulina velutipes. Journal: Bioresource Technology Volume: 102 Issue: 3, S-Page: 3316- E-Page: 3321 PubMed
  • Authors: Dahl,J.U.; Urban,A.; Bolte,A.; Sriyabhaya,P.; Donahue,J.L.; Nimtz,Manfred*; Larson,T.J.; Leimkuhler,S.; ( Year: 2011). Title: The Identification of a Novel Protein Involved in Molybdenum Cofactor Biosynthesis in Escherichia coli. Journal: Journal of Biological Chemistry Volume: 286 Issue: 41, S-Page: 35801- E-Page: 35812 PubMed
  • Authors: Bodor,A.M.; Jänsch,Lothar*; Wissing,J.; Wagner-Döbler,Irene*; ( Year: 2011). Title: The luxS mutation causes loosely-bound biofilms in Shewanella oneidensis. Journal: BMC Research Notes Volume: 4, S-Page: 180 PubMed
  • Authors: Trunk,K.; Benkert,B.; Quack,N.; Munch,R.; Scheer,M.; Garbe,J.; Jänsch,Lothar*; Trost,M.; Wehland,Jürgen*; Buer,J.; Jahn,M.; Schobert,M.; Jahn,D.; ( Year: 2010). Title: Anaerobic adaptation in Pseudomonas aeruginosa : definition of the Anr and Dnr regulons. Journal: Environmental Microbiology Volume: 12 Issue: 6, S-Page: 1719- E-Page: 1733 PubMed
  • Authors: Steinke,N.; Kaller,M.; Nimtz,Manfred*; Baro,A.; Laschat,S.; ( Year: 2010). Title: Columnar liquid crystals derived from crown ethers with two lateral ester-substituted ortho-terphenyl units: Unexpected destabilisation of the mesophase by potassium iodide. Journal: Liquid Crystals Volume: 37 Issue: 9, S-Page: 1139- E-Page: 1149
  • Authors: Mischak,H.; Kolch,W.; Aivaliotis,M.; Bouyssie,D.; Court,M.; Dihazi,H.; Dihazi,G.H.; Franke,J.; Garin,J.; de Peredo,A.G.; Iphöfer,A.; Jänsch,Lothar*; Lacroix,C.; Makridakis,M.; Masselon,C.; Metzger,J.; Monsarrat,B.; Mrug,M.; Norling,M.; Novak,J.; Pich,A.; Pitt,A.; Bongcam-Rudloff,E.; Siwy,J.; Suzuki,H.; Thongboonkerd,V.; Wang,L.-S.; Zoidakis,J.; Zurbig,P.; Schanstra,J.P.; Vlahou,A.; ( Year: 2010). Title: Comprehensive human urine standards for comparability and standardization in clinical proteome analysis. Journal: Proteomics - Clinical Applications Volume: 4 Issue: 4, S-Page: 464- E-Page: 478
  • Authors: Badar,M.; Hemmen,K.; Nimtz,Manfred*; Stieve,M.; Stiesch,M.; Lenarz,T.; Hauser,Hansjörg*; Möllmann,U.; Vogt,S.; Schnabelrauch,M.; Müller,Peter P.*; ( Year: 2010). Title: Evaluation of Madurahydroxylactone as a Slow Release Antibacterial Implant Coating. Journal: Open Biomedical Engineering Journal Volume: 4, S-Page: 263- E-Page: 270
  • Authors: Pommerenke,C.; Musken,M.; Becker,T.; Dotsch,A.; Klawonn,Frank*; Häußler,Susanne*; ( Year: 2010). Title: Global genotype-phenotype correlations in Pseudomonas aeruginosa. Journal: PLoS Pathogens Volume: 6 Issue: 8, S-Page: 89- E-Page: 90 DOI: 10.1371/journal.ppat.1001074 HZI repository PubMed
  • Authors: Stepanova,T.; Smal,I.; van,Haren J.; Akinci,U.; Liu,Z.; Miedema,M.; Limpens,R.; van,Ham Marco*; van der,Reijden M.; Poot,R.; Grosveld,F.; Mommaas,M.; Meijering,E.; Galjart,N.; ( Year: 2010). Title: History-dependent catastrophes regulate axonal microtubule behavior. Journal: Current biology Volume: 20 Issue: 11, S-Page: 1023- E-Page: 1028 PubMed
  • Authors: Teutschbein,J.; Gross,W.; Nimtz,Manfred*; Milkowski,C.; Hause,B.; Strack,D.; ( Year: 2010). Title: Identification and localization of a lipase-like acyltransferase in phenylpropanoid metabolism of tomato (Solanum lycopersicum)1. Journal: Journal of Biological Chemistry Volume: 285 Issue: 49, S-Page: 38374- E-Page: 38381 PubMed
  • Authors: Tschumitschew,K.; Klawonn,Frank*; ( Year: 2010). Title: Incremental quantile estimation. Journal: Evolving Systems Volume: 1 Issue: 4, S-Page: 253- E-Page: 264
  • Authors: Klodmann,J.; Sunderhaus,S.; Nimtz,Manfred*; Jänsch,Lothar*; Braun,H.P.; ( Year: 2010). Title: Internal architecture of mitochondrial complex I from Arabidopsis thaliana. Journal: Plant Cell Volume: 22 Issue: 3, S-Page: 797- E-Page: 810 PubMed
  • Authors: El-Banna,A.; Hajirezaei,M.R.; Wissing,Josef*; Ali,Z.; Vaas,L.; Heine-Dobbernack,E.; Jacobsen,H.J.; Schumacher,H.M.; Kiesecker,H.; ( Year: 2010). Title: Over-expression of PR-10a leads to increased salt and osmotic tolerance in potato cell cultures. Journal: Journal of Biotechnology Volume: 150 Issue: 3, S-Page: 277- E-Page: 287 PubMed
  • Authors: Lu,X.; Sun,J.; Nimtz,Manfred*; Wissing,J.; Zeng,A.-P.; Rinas,Ursula*; ( Year: 2010). Title: The intra- and extracellular proteome of Aspergillus niger growing on defined medium with xylose or maltose as carbon substrate. Journal: Microbial Cell Factories Volume: 9 Issue: 23, S-Page: 1- E-Page: 13 DOI: 10.1186/1475-2859-9-23 HZI repository PubMed
  • Authors: Tschumitschew,K.; Klawonn,Frank*; ( Year: 2010). Title: The need for benchmarks with data from stochastic processes and meta-models in evolving systems. Book Title: Proceedings of the International Symposium on Evolving Intelligent Systems Editors: Angelov,P.; Filev,D.; Kasabov,N.; (Ed.). City: Leicester Publisher: SSAISB, S-Page: 30- E-Page: 33
  • Authors: Maahs,D.M.; Siwy,J.; Argiles,A.; Cerna,M.; Delles,C.; Dominiczak,A.F.; Gayrard,N.; Iphöfer,A.; Jänsch,Lothar*; Jerums,G.; Medek,K.; Mischak,H.; Navis,G.J.; Roob,J.M.; Rossing,K.; Rossing,P.; Rychlik,I.; Schiffer,E.; Schmieder,R.E.; Wascher,T.C.; Winklhofer-Roob,B.M.; Zimmerli,L.U.; Zurbig,P.; Snell-Bergeon,J.K.; ( Year: 2010). Title: Urinary collagen fragments are significantly altered in diabetes: a link to pathophysiology. Journal: PLoS ONE Volume: 5 Issue: 9 DOI: 10.1371/journal.pone.0013051 HZI repository PubMed
  • Authors: Fraatz,M.A.; Riemer,S.J.L.; Stober,R.; Kaspera,R.; Nimtz,Manfred*; Berger,R.G.; Zorn,H.; ( Year: 2009). Title: A novel oxygenase from Pleurotus sapidus transforms valencene to nootkatone. Journal: Journal of Molecular Catalysis B: Enzymatic Volume: 61 Issue: 3-4, S-Page: 202- E-Page: 207
  • Authors: Tschumitschew,K.; Klawonn,Frank*; ( Year: 2009). Title: AVEDA: Statistical tests for finding interesting visulatisations. Journal: 5711 LNAI (Part 1) Volume: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics, S-Page: 235- E-Page: 242
  • Authors: Höppner,F.; Klawonn,Frank*; ( Year: 2009). Title: Compensation of translational displacement in time series clustering using cross correlation. Journal: Lecture Notes in Computer Science Volume: (57772 LCNS), S-Page: 71- E-Page: 82
  • Authors: Dötsch,A.; Becker,T.; Pommerenke,C.; Magnowska,Z.; Jänsch,Lothar*; Häußler,Susanne*; ( Year: 2009). Title: Genomewide identification of genetic determinants of antimicrobial drug resistance in Pseudomonas aeruginosa. Journal: Antimicrobial Agents and Chemotherapy Volume: 53 Issue: 6, S-Page: 2522- E-Page: 2531 DOI: 10.1128/AAC.00035-09 HZI repository PubMed
  • Authors: Krügener,S.; Zelena,K.; Zorn,H.; Nimtz,Manfred*; Berger,R.G.; ( Year: 2009). Title: Heterologous expression of an extra-cellular lipase from the basidiomycete Pleurotus sapidus. Journal: Journal of Molecular Catalysis B: Enzymatic Volume: 57, S-Page: 16- E-Page: 21
  • Authors: Kleine-Ostmann,T.; Jastrow,C.; Salhi,M.; Schrader,T.; Hintzsche,H.; Stopper,H.; Kärst,Uwe*; Heinen,B.; Baaske,K.; Koch,M.; ( Year: 2009). Title: In vitro field exposition of skin cells between 100 GHz and 2.52 THz. Book Title: Infrared, Millimeter, and Terahertz Waves, 2009. IRMMW-THz 2009. 34th International Conference on, S-Page: 1- E-Page: 2
  • Authors: Weiss,S.M.; Ladwein,M.; Schmidt,D.; Ehinger,J.; Lommel,S.; Städing,K.; Beutling,U.; Disanza,A.; Frank,Ronald*; Jänsch,Lothar*; Scita,G.; Gunzer,F.; Rottner,Klemens*; Stradal,Theresia E.*; ( Year: 2009). Title: IRSp53 links the enterohemorrhagic E. coli effectors Tir and EspFU for actin pedestal formation. Journal: Cell Host and Microbe Volume: 5 Issue: 3, S-Page: 244- E-Page: 258 PubMed
  • Authors: Hundertmark,C.; Fischer,R.; Reinl,T.; May,S.; Klawonn,F.; Jänsch,Lothar*; ( Year: 2009). Title: MS-specific noise model reveals the potential of iTRAQ in quantitative proteomics. Journal: Bioinformatics Volume: 25 Issue: 8, S-Page: 1004- E-Page: 1011 DOI: 10.1093/bioinformatics/btn551 HZI repository PubMed
  • Authors: Reinl,T.; Nimtz,M.; Hundertmark,C.; Johl,T.; Keri,G.; Wehland,Jürgen*; Daub,H.; Jänsch,Lothar*; ( Year: 2009). Title: Quantitative phosphokinome analysis of the met pathway activated by the invasin internalin B from Listeria monocytogenes. Journal: Molecular and Cellular Proteomics Volume: 8 Issue: 12, S-Page: 2778- E-Page: 2795 PubMed
  • Authors: Peters,K.; Dudkina,N.V.; Jänsch,Lothar*; Braun,H.P.; Boekema,E.J.; ( Year: 2008). Title: A structural investigation of complex I and I+III(2) supercomplex from Zea mays at 11-13 A resolution: Assignment of the carbonic anhydrase domain and evidence for structural heterogeneity within complex I. Journal: Biochimica et biophysica acta Volume: 1777 Issue: 1, S-Page: 84- E-Page: 93 DOI: 10.1016/j.bbabio.2007.10.012 HZI repository PubMed
  • Authors: Hundertmark,Claudia*; Klawonn,Frank*; ( Year: 2008). Title: Clustering likelihood curves: Finding deviations from single clusters. Book Title: Hybrid Artificial Intelligence Systems Editors: Carchado,E.; Abraham,A.; Pedrycz,W.; (Ed.). City: Berlin Heidelberg Publisher: Springer Verlag, S-Page: 385- E-Page: 391 ISBN: 978-3-540-97655-7 (ISBN) DOI: 10.1007/978-3-540-87656-4
  • Authors: Machata,S.; Tchatalbachev,S.; Mohamed,W.; Jänsch,Lothar*; Hain,T.; Chakraborty,T.; ( Year: 2008). Title: Lipoproteins of Listeria monocytogenes are critical for virulence and TLR2-mediated immune activation. Journal: Journal of Immunology Volume: 181 Issue: 3, S-Page: 2028- E-Page: 2035 PubMed
  • Authors: Benkert,B.; Quack,N.; Schreiber,K.; Jänsch,Lothar*; Jahn,D.; Schobert,M.; ( Year: 2008). Title: Nitrate-responsive NarX-NarL represses arginine-mediated induction of the Pseudomonas aeruginosa arginine fermentation arcDABC operon1. Journal: Microbiology Volume: 154 Issue: Pt 10, S-Page: 3053- E-Page: 3060 PubMed
  • Authors: Klein,J.; Leupold,S.; Munch,R.; Pommerenke,C.; Johl,T.; Karst,U.; Jänsch,Lothar*; Jahn,D.; Retter,I.; ( Year: 2008). Title: ProdoNet: identification and visualization of prokaryotic gene regulatory and metabolic networks. Journal: Nucleic Acids Research Volume: 36 Issue: Web Server issue, S-Page: W460- E-Page: W464 PubMed
  • Authors: Schroder,S.; Zhang,H.; Yeung,E.S.; Jänsch,Lothar*; Zabel,C.; Watzig,H.; ( Year: 2008). Title: Quantitative gel electrophoresis: sources of variation. Journal: Journal of Proteome Research Volume: 7 Issue: 3, S-Page: 1226- E-Page: 1234 PubMed
  • Authors: Mort,A.; Zheng,Y.; Qiu,F.; Nimtz,Manfred*; Bell-Eunice,G.; ( Year: 2008). Title: Structure of xylogalacturonan fragments from watermelon cell-wall pectin. Endopolygalacturonase can accommodate a xylosyl residue on the galacturonic acid just following the hydrolysis site. Journal: Carbohydrate Research Volume: 343 Issue: 7, S-Page: 1212- E-Page: 1221 PubMed
  • Authors: Biedendieck,R.; Gamer,M.; Jänsch,Lothar*; Meyer,S.; Rohde,Manfred*; Deckwer,Wolf-Dieter*; Jahn,D.; ( Year: 2007). Title: A sucrose-inducible promoter system for the intra- and extracellular protein production in Bacillus megaterium. Journal: Journal of Biotechnology Volume: 132 Issue: 4, S-Page: 426- E-Page: 430 DOI: 10.1016/j.jbiotec.2007.07.494 Fulltext HZI repository
  • Authors: Baumgärtner,M.; Kärst,Uwe*; Gerstel,B.; Loessner,M.; Wehland,Jürgen*; Jänsch,Lothar*; ( Year: 2007). Title: Inactivation of Lgt allows systematic characterization of lipoproteins from Listeria monocytogenes. Journal: Journal of Bacteriology Volume: 189 Issue: 2, S-Page: 313- E-Page: 324 DOI: 10.1128/JB.00976-06 HZI repository PubMed
  • Authors: Hain,T.; Chatterjee,S.S.; Ghai,R.; Kuenne,C.T.; Billion,A.; Steinweg,C.; Domann,E.; Kärst,Uwe*; Jänsch,Lothar*; Wehland,Jürgen*; Eisenreich,W.; Bacher,A.; Joseph,B.; Schär,J.; Kreft,J.; Klumpp,J.; Loessner,M.J.; Dorscht,J.; Neuhaus,K.; Fuchs,T.M.; Scherer,S.; Doumith,M.; Jacquet,C.; Martin,P.; Cossart,P.; Glaser,P.; Buchrieser,C.; Goebel,W.; Chakraborty,T.; ( Year: 2007). Title: Pathogenomics of Listeria spp.. Journal: International Journal of Medical Microbiology Volume: 297 Issue: 7-8, S-Page: 541- E-Page: 557 DOI: 10.1016/j.ijmm.2007.03.016 PubMed
  • Authors: Newo,A.N.S.; Lützelberger,M.; Bottner,C.A.; Wehland,Jürgen*; Wissing,Josef*; Jänsch,Lothar*; Käufer,N.F.; ( Year: 2007). Title: Proteomic analysis of the U1 snRNP of Schizosaccharomyces pombe reveals three essential organism-specific proteins. Journal: Nucleic Acids Research Volume: 35 Issue: 5, S-Page: 1391- E-Page: 1401
  • Authors: Wissing,Josef*; Jänsch,Lothar*; Nimtz,Manfred*; Dieterich,G.; Hornberger,R.; Keri,G.; Wehland,Jürgen*; Daub,H.; ( Year: 2007). Title: Proteomics analysis of protein kinases by target class-selective pre-fractionation and tandem mass spectrometry. Journal: Molecular & Cellular Proteomics Volume: 6 Issue: 3, S-Page: 537- E-Page: 547 DOI: 10.1074/mcp.T600062-MCP200 HZI repository PubMed
  • Authors: Schreiber,K.; Boes,N.; Eschbach,M.; Jänsch,Lothar*; Wehland,J.; Bjarnsholt,T.; Giskov,M.; Hentzer,M.; Schobert,M.; ( Year: 2006). Title: Anaerobic survival of Pseudomonas aeruginosa by pyruvate fermentation requires an Usp-type stress protein. Journal: Journal of Bacteriology Volume: 188, S-Page: 659- E-Page: 668 DOI: 10.1128/JB.188.2.659-668.2006 HZI repository PubMed
  • Authors: Sunderhaus,S.; Dudkina,N.V.; Jänsch,Lothar*; Klodmann,J.; Heinemeyer,J.; Perales,M.; Zabaleta,E.; Boekema,E.J.; Braun,H.P.; ( Year: 2006). Title: Carbonic anhydrase subunits form a matrix-exposed domain attached to the membrane arm of mitochondrial complex I in plants. Journal: Journal of Biological Chemistry Volume: 281 Issue: 10, S-Page: 6482- E-Page: 6488 WORKTYPE HZI repository PubMed
  • Authors: Beller,M.; Riedel,D.; Jänsch,Lothar*; Dieterich,D.; Wehland,Jürgen*; Jackle,H.; Kuhnlein,R.P.; ( Year: 2006). Title: Characterization of the Drosophila Lipid Droplet Subproteome. Journal: Molecular & Cellular Proteomics Volume: 5, S-Page: 1082- E-Page: 1094 DOI: 10.1074/mcp.M600011-MCP200 HZI repository PubMed
  • Authors: Wegener,C.; Reinl,T.; Jänsch,Lothar*; Predel,R.; ( Year: 2006). Title: Direct mass spectrometric peptide profiling and fragmentation of larval peptide hormone release sites in Drosophila melanogaster reveals tagma-specific peptide expression and differential processing. Journal: Journal of Neurochemistry Volume: 96 Issue: 5, S-Page: 1362- E-Page: 1374 ISI
  • Authors: Phan-Thanh,L.; Jänsch,Lothar*; ( Year: 2006). Title: Elucidation of mechanisms of acid stress in Listeria monocytogenes by proteomic analysis. Book Title: Microbial Proteomics - Functional Biology of Whole Organisms Editors: Humphery-Smith,I.; Hecker,M.; (Ed.). City: Hoboken, New Jersey Publisher: John Wiley & Sons, S-Page: 75- E-Page: 88
  • Authors: Scheer,M.; Klawonn,F.; Munch,R.; Grote,A.; Hiller,K.; Choi,C.; Koch,I.; Schobert,M.; Hartig,E.; Klages,U.; Jahn,D.; ( Year: 2006). Title: JProGO: a novel tool for the functional interpretation of prokaryotic microarray data using Gene Ontology information. Journal: Nucleic Acids Res Volume: 34 Issue: Web Server issue, S-Page: W510- E-Page: W515 PubMed
  • Authors: Dieterich,G.; Kärst,Uwe*; Fischer,E.; Wehland,Jürgen*; Jänsch,Lothar*; ( Year: 2006). Title: LEGER: knowledge database and visualization tool for comparative genomics of pathogenic and non-pathogenic Listeria species. Journal: Nucleic Acids Research Volume: 34, S-Page: D402- E-Page: D406
  • Authors: Reinl,Tobias*; Wissing,Josef*; Fischer,R.; Hundertmark,C.; Klawonn,F.; Daub,H.; Wehland,Jürgen*; Jänsch,Lothar*; ( Year: 2006). Title: Quantitative analysis of receptor tyrosine kinase signaling exploited by Listeria monocytogenes. Journal: Molecular & Cellular Proteomics Volume: 5 Issue: 10, S-Page: S168- E-Page: S168 654 Suppl.
  • Authors: Nalca,Y.; Jänsch,Lothar*; Bredenbruch,F.; Geffers,Robert*; Buer,Jan*; Häußler,Susanne*; ( Year: 2006). Title: Quorum-sensing antagonistic activities of azithromycin in Pseudomonas aeruginosa PAO1: a global approach. Journal: Antimicrobial Agents and Chemotherapy Volume: 50, S-Page: 1680- E-Page: 1688 DOI: 10.1128/AAC.50.5.1680-1688.2006 HZI repository PubMed
  • Authors: Schaumburg,J.; Diekmann,O.; Hagendorff,P.; Bergmann,S.; Rohde,Manfred*; Hammerschmidt,S.; Jänsch,Lothar*; Wehland,Jürgen*; Kärst,Uwe*; ( Year: 2006). Title: The cell wall subproteome of Listeria monocytogenes. Book Title: Proteomics of Microbial Pathogens Editors: Jungblut,P.R.; Hecker,M.; (Ed.). City: Weinheim Publisher: Wiley-VCH, S-Page: 153- E-Page: 177
  • Authors: Thedieck,K.; Hain,T.; Mohamed,W.; Tindall,B.; Nimtz,Manfred*; Chakraborty,T.; Wehland,Jürgen*; Jänsch,Lothar*; ( Year: 2006). Title: The MprF protein is required for lysinylation of phospholipids in listerial membranes and confers resistance to cationic antimicrobial peptides (CAMPs) on Lysteria monocytogenes. Journal: Molecular Microbiology Volume: 62, S-Page: 1325- E-Page: 1339 DOI: 10.1111/j.1365-2958.2006.05452.x HZI repository PubMed
  • Authors: Boes,N.; Schreiber,K.; Hartig,E.; Jaensch,Lothar*; Schobert,M.; ( Year: 2006). Title: The Pseudomonas aeruginosa universal stress protein PA4352 is essential for surviving anaerobic energy stress. Journal: Journal of Bacteriology Volume: 188 Issue: 18, S-Page: 6529- E-Page: 6538 ISI
  • Authors: Layer,G.; Pierik,A.J.; Trost,M.; Jänsch,Lothar*; Leech,H.K.; Warren,M.J.; Rigby,S.E.; Astner,I.; Grage,K.; Breckau,D.; Heinz,Dirk W.*; Jahn,D.; ( Year: 2006). Title: The substrate radical of Escherichia coli oxygen-independent coproporphyrinogen III oxidase HemN. Journal: Journal of Biological Chemistry Volume: 281, S-Page: 15727- E-Page: 15734
  • Authors: Dieterich,G.; Kärst,Uwe*; Wehland,Jürgen*; Jänsch,Lothar*; ( Year: 2006). Title: VIS-O-BAC: exploratory visualization of functional genome studies from bacteria. Journal: Bioinformatics Volume: 22 Issue: 5, S-Page: 630- E-Page: 631 DOI: 10.1093/bioinformatics/bti814
  • Authors: Trost,M.; Wehmhöner,D.; Kärst,U.; Dieterich,G.; Wehland,J.; Jänsch,L.; ( Year: 2005). Title: Comparative proteome analysis of secretory proteins from pathogenic and non-pathogenic Listeria species. Journal: Proteomics Volume: 5, S-Page: 1544- E-Page: 1557
  • Authors: Jacobsen,I.; Hennig-Pauka,I.; Baltes,N.; Trost,Matthias*; Gerlach,G.F.; ( Year: 2005). Title: Enzymes involved in anaerobic respiration appear to play a role in Actinobacillus pleuropneumoniae virulence. Journal: Infection and Immunity Volume: 73 Issue: 1, S-Page: 226- E-Page: 234 DOI: 10.1128/IAI.73.1.226-234.2005 HZI repository PubMed
  • Authors: Dieterich,G.; Kärst,U.; Wehland,J.; Jänsch,L.; ( Year: 2005). Title: MineBlast: A literature presentation service supporting protein annotation by data Mining of blast results. Journal: Bioinformatics Volume: 21, S-Page: 3450- E-Page: 3451
  • Authors: Godl,K.; Gruss,O.J.; Eickhoff,J.; Wissing,Josef*; Blencke,S.; Weber,M.; Degen,H.; Brehmer,D.; Orfi,L.; Horvath,Z.; Keri,G.; Muller,S.; Cotten,M.; Ullrich,A.; Daub,H.; ( Year: 2005). Title: Proteomic characterization of the angiogenesis inhibitor SU6668 reveals multiple impacts on cellular kinase signaling. Journal: Cancer Research Volume: 65 Issue: 15, S-Page: 6919- E-Page: 6926 DOI: 10.1158/0008-5472.CAN-05-0574 PubMed
  • Authors: Millar,A.H.; Eubel,H.; Jänsch,Lothar*; Kruft,V.; Heazlewood,J.L.; Braun,H.P.; ( Year: 2004). Title: Mitochondrial cytochrome c oxidase and succinate dehydrogenase complexes contain plant specific subunits. Journal: Plant Molecular Biology Volume: 56 Issue: 1, S-Page: 77- E-Page: 90 PubMed
  • Authors: Weig,M.; Jänsch,L.; Groß,U.; De Koster,C.G.; Klis,F.M.; De Groot,P.W.J.; ( Year: 2004). Title: Systematic identification of covalently-bound cell wall proteins and analysis of protein-polysaccharide linkages of the human pathogen Candida glabrata. Journal: Microbiology Volume: 150, S-Page: 3129- E-Page: 3144
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