Helmholtz Zentrum für Infektionsforschung

Xue, X., Li, J., Wang, W., Sztajer, H. and I. Wagner Döbler ; (2012). The global impact of the delta subunit RpoE of the RNA polymerase on the proteome of Streptococcus mutans.. Microbiology: Jan; 158, 191-206

Stelzer,M.; Sun,Jibin*; Kamphans,T.; Fekete,S.P.; Zeng,A.P.; (2011). An extended bioreaction database that significantly improves reconstruction and analysis of genome-scale metabolic networks. Integrative Biology: 3 11, 1071-1086

Brinkhoff, T., Fischer, D., Vollmers, J., Voget, S., Beardsley, C., Thole, S., Mussmann, M., Kunze, B., Wagner-Döbler, I., Daniel, R., Simon, M.; (2011). Biogeography and phylogenetic diversity of a cluster of exclusively marine myxobacteria. ISME:

Xue,X.; Sztajer,H.; Buddruhs,N.; Petersen,J.; Rohde,Manfred*; Talay,S.R.; Wagner-Döbler,Irene*; (2011). Lack of the Delta Subunit of RNA Polymerase Increases Virulence Related Traits of Streptococcus mutans. PLoS ONE: 6 5, e20075

Lemme,A.; Grobe,L.; Reck,M.; Tomasch,J.; Wagner-Döbler,Irene*; (2011). Subpopulation-Specific Transcriptome Analysis of Competence-Stimulating-Peptide-Induced Streptococcus mutans. Journal of Bacteriology: 193 8, 1863-1877 HZI-Repositorium PubMed

Reck,M.; Rutz,K.; Kunze,B.; Tomasch,J.; Surapaneni,S.K.; Schulz,S.; Wagner-Döbler,Irene*; (2011). The biofilm inhibitor carolacton disturbs membrane integrity and cell division of Streptococcus mutans through the serine/threonine protein kinase PknB. Journal of Bacteriology: 193 20, 5692-5706

Xue,X.; Li,J.; Wang,W.; Sztajer,H.; Wagner-Döbler,Irene*; (2011). The global impact of the delta subunit RpoE of the RNA polymerase on the proteome of Streptococcus mutans. Microbiology: 158 1, 191-206

Bodor,A.M.; Jänsch,Lothar*; Wissing,J.; Wagner-Döbler,Irene*; (2011). The luxS mutation causes loosely-bound biofilms in Shewanella oneidensis. BMC Research Notes: 4, 180

Tomasch,J.; Gohl,R.; Bunk,B.; Suarez-Diez,M.; Wagner-Döbler,Irene*; (2011). Transcriptional response of the photoheterotrophic marine bacterium Dinoroseobacter shibae to changing light regimes. ISME Journal: 5 12, 1957-1968

Schulz,S.; Dickschat,J.S.; Kunze,B.; Wagner-Döbler,Irene*; Diestel,R.; Sasse,Florenz*; (2010). Biological activity of volatiles from marine and terrestrial bacteria. Marine Drugs: 8, 2976-2987

Lemme,A.; Sztajer,Helena*; Wagner-Döbler,Irene*; (2010). Characterization of mleR, a positive regulator of malolactic fermentation and part of the acid tolerance response in Streptococcus mutans. BMC Microbiology: 10, 58 HZI-Repositorium PubMed

Riedel,T.; Tomasch,J.; Buchholz,I.; Jacobs,J.; Kollenberg,M.; Gerdts,G.; Wichels,A.; Brinkhoff,T.; Cypionka,H.; Wagner-Döbler,Irene*; (2010). Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsin-producing microbial community in the North Sea. Applied in Environmental Microbiology: 76 10, 3187-3197

Kunze,B.; Reck,M.; Dotsch,A.; Lemme,A.; Schummer,D.; Irschik,Herbert*; Steinmetz,H.; Wagner-Döbler,Irene*; (2010). Damage of Streptococcus mutans biofilms by carolacton, a secondary metabolite from the myxobacterium Sorangium cellulosum. BMC Microbiology: 10, 199

Thiel,V.; Brinkhoff,T.; Dickschat,J.S.; Wickel,S.; Grunenberg,J.; Wagner-Döbler,Irene*; Simon,M.; Schulz,S.; (2010). Identification and biosynthesis of tropone derivatives and sulfur volatiles produced by bacteria of the marine Roseobacter clade. Organic and Biomolecular Chemistry: 8 1, 234-246

Vilchez,R.; Lemme,A.; Ballhausen,B.; Thiel,V.; Schulz,S.; Jansen,Rolf*; Sztajer,Helena*; Wagner-Döbler,Irene*; (2010). Streptococcus mutans Inhibits Candida albicans hyphal formation by the fatty acid signaling molecule trans-2-decenoic acid (SDSF). ChemBioChem: 11 11, 1552-1562

Nawrath,T.; Dickschat,J.S.; Kunze,Brigitte*; Schulz,S.; (2010). The biosynthesis of branched dialkylpyrazines in myxobacteria. Chemistry and Biodiversity: 7 9, 2129-2144 PubMed

Wagner-Döbler, I., Ballhausen, B., Baumgart, M., Brinkhoff, T., Buchholz, I., Bunk, B., Cypionka, H., Daniel, R., Drepper, T., Gerdts, G., Hahnke, S., Han, C., Jahn, D., Kalhoefer, D., Kiss, H., Klenk, H-P., Kyrpides, N., Liebl, W., Liesegang, H., Meincke, L., Pati, A., Petersen, J., Piekarski, T., Pommerenke, C., Pradella, S., Pukall, R., Rabus, R., Stackebrandt, E., Thole, S., Thompson, L., Tielen, P., Tomasch, J., von Jan, M., Wanphrut, N., Wichels, A., Zech, H., Simon, M. ; (2010). The complete genome sequence of the algal symbiont Dinoroseobacter shibae - a hitchhiker´s guide to life in the sea.. ISME: 4 (1), 61-77

Xue,X.; Tomasch,J.; Sztajer,H.; Wagner-Döbler,Irene*; (2010). The delta subunit of RNA polymerase, RpoE, is a global modulator of Streptococcus mutans environmental adaptation. Journal of Bacteriology: 192 19, 5081-5092 HZI-Repositorium PubMed

Piekarski,T.; Buchholz,I.; Drepper,T.; Schobert,M.; Wagner-Döbler,Irene*; Tielen,P.; Jahn,D.; (2009). Genetic tools for the investigation of Roseobacter clade bacteria. BMC Microbiology: 9, 265

Gawlitzek,M.; Estacio,M.; Fürch,Tobias*; Kiss,R.; (2009). Identification of cell culture conditions to control N-glycosylation site-occupancy of recombinant glycoproteins expressed in CHO cells. Biotechnology and Bioengineering: 103 6, 1164-1175

Thiel,V.; Vilchez,R.; Sztajer,Helena*; Wagner-Döbler,Irene*; Schulz,S.; (2009). Identification, quantification, and determination of the absolute configuration of the bacterial quorum-sensing signal autoinducer-2 by gas chromatography-mass spectrometry. ChemBioChem: 10 3, 479-485

Gluszcz,P.; Ledakowicz,S.; Wagner-Döbler,Irene*; Janiszewska,I.; Boruta,D.; (2009). Integrated industrial plant for biological treatment of mercury - Contaminated wastewater. Przemysl Chemiczny: 88 12, 1352-1358

Furch,T.; Preusse,M.; Tomasch,J.; Zech,H.; Wagner-Döbler,Irene*; Rabus,R.; Wittmann,C.; (2009). Metabolic fluxes in the central carbon metabolism of Dinoroseobacter shibae and Phaeobacter gallaeciensis, two members of the marine Roseobacter clade. BMC Microbiology: 9, 209

Thiel,V.; Kunze,Brigitte*; Verma,P.; Wagner-Döbler,Irene*; Schulz,S.; (2009). New structural variants of homoserine lactones in bacteria. ChemBioChem: 10 11, 1861-1868

Li,Jinshan*; Menche,D.; (2009). Selective deprotection of silyl ethers with sodium periodate. Synthesis: 11 art. no. Zo1709SS, 1904-1908

Wagner-Döbler,Irene*; Ballhausen,B.; Berger,M.; Brinkhoff,T.; Buchholz,I.; Bunk,B.; Cypionka,H.; Daniel,R.; Drepper,T.; Gerdts,G.; Hahnke,S.; Han,C.; Jahn,D.; Kalhoefer,D.; Kiss,H.; Klenk,H.P.; Kyrpides,N.; Liebl,W.; Liesegang,H.; Meincke,L.; Pati,A.; Petersen,J.; Piekarski,T.; Pommerenke,C.; Pradella,S.; Pukall,R.; Rabus,R.; Stackebrandt,E.; Thole,S.; Thompson,L.; Tielen,P.; Tomasch,J.; von,Jan M.; Wanphrut,N.; Wichels,A.; Zech,H.; Simon,M.; (2009). The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea. ISME Journal: 4 1, 61-77

Sztajer,Helena*; Lemme,A.; Vilchez,R.; Schulz,S.; Geffers,Robert*; Yip,C.Y.Y.; Levesque,C.M.; Cvitkovitch,D.G.; Wagner-Döbler,Irene*; (2008). Autoinducer-2-regulated genes in Streptococcus mutans UA159 and global metabolic effect of the luxS mutation. Journal of Bacteriology: 190 1, 401-415 HZI-Repositorium PubMed

Gluszcz,P.; Zakrzewska,K.; Wagner-Döbler,Irene*; Ledakowicz,S.; (2008). Bioreduction of ionic mercury from wastewater in a fixed-bed bioreactor with activated carbon. Chemical Papers: 62 3, 232-238

Höfle,Gerhard*; Kunze,Brigitte*; (2008). Biosynthesis of Aurachins A-L in Stigmatella aurantiaca : A Feeding Study. Journal of Natural Products: 71 11, 1843-1849

Eggert,U.; Diestel,R.; Sasse,Florenz*; Jansen,Rolf*; Kunze,Brigitte*; Kalesse,Markus*; (2008). Chondramide C: Synthesis, configurational assignment, and structure-activity relationship studies. Angewandte Chemie - International Edition: 47 43, 6478-6482

Surup,F.; Shojaei,H.; von,Zezschwitz P.; Kunze,Brigitte*; Grond,S.; (2008). Iromycins from Streptomyces sp. and from synthesis: new inhibitors of the mitochondrial electron transport chain. Bioorganic & Medicinal Chemistry: 16 4, 1738-1746 HZI-Repositorium PubMed

Kunze,Brigitte*; Böhlendorf,B.; Reichenbach,Hans*; Höfle,Gerhard*; (2008). Pedein A and B: Production, isolation, structure elucidation and biological properties of new antifungal cyclopeptides from Chondromyces pediculatus (myxobacteria). Journal of Antibiotics: 61 1, 18-26

Bodor,A.; Elxnat,B.; Thiel,V.; Schulz,S.; Wagner-Döbler,Irene*; (2008). Potential for luxS related signalling in marine bacteria and production of autoinducer-2 in the genus Shewanella. BMC Microbiology: 8, 13 HZI-Repositorium PubMed

Sztajer, H., Lemme, A., I. Wagner-Döbler; (2008). Quorum Sensing und Karies. BIOSpektrum: 6, 2-5

Pommerenke,C.; Gabriel,I.; Bunk,B.; Munch,R.; Haddad,I.; Tielen,P.; Wagner-Döbler,Irene*; Jahn,D.; (2008). ROSY--a flexible and universal database and bioinformatics tool platform for Roseobacter related species. In Silico Biology: 8 2, 177-186

Höfle,Gerhard*; Bohlendorf,B.; Fecker,T.; Sasse,Florian*; Kunze,Brigitte*; (2008). Semisynthesis and Antiplasmodial Activity of the Quinoline Alkaloid Aurachin E. Journal of Natural Products: 71 11, 1967-1969

Vintonyak,V.V.; Cala,M.; Lay,F.; Kunze,Brigitte*; Sasse,Florian*; Maier,M.E.; (2008). Synthesis and biological evaluation of cruentaren A analogues. Chemistry - A European Journal: 14 12, 3709-3720

Vintonyak,V.V.; Kunze,Brigitte*; Sasse,Florian*; Maier,M.E.; (2008). Total synthesis and biological activity of neopeltolide and analogues. Chemistry: 14 35, 11132-11140

Sandmann,A.; Dickschat,J.; Jenke-Kodama,H.; Kunze,Brigitte*; Dittmann,E.; Müller,Rolf; (2007). A type II polyketide synthase from the Gram negative bacterium Stigmatella aurantiaca is involved in aurachin alkaloid biosynthesis. Angewandte Chemie - International Edition: 46, 2712-2716

Chiu,H.-H.; Shieh,W.Y.; Lin,S.Y.; Tseng,C.-M.; Chiang,P.-W.; Wagner-Döbler,Irene*; (2007). Alteromonas tagae sp. nov. and Alteromonas simiduii sp. nov., mercury-resistant bacteria isolated from a Taiwanese estuary. International Journal of Systematic and Evolutionary Microbiology: 57, 1209-1216 Volltext HZI-Repositorium

Vilchez,R.; Lemme,A.; Thiel,V.; Schulz,S.; Sztajer,Helena*; Wagner-Döbler,Irene*; (2007). Analysing traces of autoinducer-2 requires standardization of the Vibrio harveyi bioassay. Analytical and Bioanalytical Chemistry: 387 2, 489-496 HZI-Repositorium PubMed

Kunze,Brigitte*; Sasse,Florian*; Wieczorek,H.; Huss,M.; (2007). Cruentaren A, a highly cytotoxic benzolactone from Myxobacteria is a novel selective inhibitor of mitochondrial F1-ATPases. Febs Letters: 581 18, 3523-3527

Biebl,Hanno*; Pukall,R.; Lünsdorf,Heinrich*; Schulz,S.; Allgaier,M.; Tindall,B.J.; Wagner-Döbler,Irene*; (2007). Description of Labrenzia alexandrii gen. nov., sp. nov., a novel alphaproteobacterium containing bacteriochlorophyll a, and a proposal reclassification of Stappia aggregata as Labrenzia aggregata comb. nov., and of Stappia alba as Labrenzia alba comb. nov. International Journal of Systematic and Evolutionary Microbiology: 57 5, 1095-1107 HZI-Repositorium PubMed

Leonhäuser,J.; Wang,W.; Deckwer,Wolf-Dieter*; Wagner-Döbler,Irene*; (2007). Functioning of the mercury resistance operon at extremely high Hg(II) loads in a chemostat: A proteome analysis. Journal of Biotechnology: 132 4, 469-480 HZI-Repositorium PubMed

Sobik,P.; Grunenberg,J.; Böröczky,K.; Laatsch,H.; Wagner-Döbler,Irene*; Schulz,S.; (2007). Identification, synthesis, and conformation of tri- and tetrathiacycloalkanes from marine bacteria. Journal of Organic Chemistry: 72 10, 3776-3782 HZI-Repositorium PubMed

Gluszcz,P.; Wagner-Döbler,Irene*; Zakrzewska,K.; Ledakowicz,S.; (2007). Integrated process of ionic mercury bioreduction and adsorption from wastewater. Inzynieria Chemiczna i Procesowa: 28 4, 909-920

Steinmetz,Heinrich*; Irschik,Herbert*; Kunze,Brigitte*; Reichenbach,Hans*; Höfle,Gerhard*; Jansen,Rolf*; (2007). Thuggacins, macrolide antibiotics active against Mycobacterium tuberculosis : isolation from myxobacteria, structure elucidation, conformation analysis and biosynthesis. Chemisty - A European Journal: 13 20, 5822-5832

Müller,I.; Weinig,S.; Steinmetz,Heinrich*; Kunze,Brigitte*; Veluthoor,S.; Mahmud,T.; Müller,R.; (2006). A unique mechanism for methyl ester formation via an amide intermediate found in myxobacteria. ChemBioChem: 7 8, 1197-1205 HZI-Repositorium PubMed

Böröczky,K.; Laatsch,H.; Wagner-Döbler,Irene*; Schulz,S.; (2006). Cluster analysis as selection and dereplication tool for the identification of new natural compounds from large sample sets. Chemistry & Biodiversity: 3 6, 622-634

Kunze,Brigitte*; Steinmetz,Heinrich*; Höfle,G.; Huss,M.; Wieczorek,H.; Reichenbach,H.; (2006). Cruentaren, a new antifungal salicylate-type macrolide from Byssovorax cruenta (Myxobacteria) with inhibitory effect on mitochondrial ATPase activity. Fermentation and biological properties. Journal of Antibiotics: 59, 664-668

Wagner-Döbler,Irene*; Biebl,Hanno*; (2006). Environmental Biology of the Marine Roseobacter Lineage. Annual Review of Microbiology: 60, 255-280 HZI-Repositorium PubMed

Biebl,Hanno*; Wagner-Döbler,Irene*; (2006). Growth and bacteriochlorophyll a formation in taxonomically diverse aerobic anoxygenic phototrophic bacteria in chemostat culture: Influence of light regimen and starvation. Process Biochemistry: 41 10, 2153-2159 HZI-Repositorium

Biebl,H.; Tindall,B.; Pukall,R.; Lünsdorf,H.; Allgaier,M.; Wagner-Döbler,I.; (2006). Hoeflea phototrophica , nov. sp., a new marine aerobic Alphaproteobacterium that forms bacteriochlorophyll a. International Journal of Systematic and Evolutionary Microbiology: 56, 821-826 HZI-Repositorium PubMed

Jundt,Larissa*; Steinmetz,Heinrich*; Luger,P.; Weber,M.; Kunze,Brigitte*; Reichenbach,H.; Höfle,G.; (2006). Isolation and structure elucidation of cruentaren A and B - novel members of the benzolactone class of ATPase inhibitors from the myxobacterium Byssovorax cruenta. European Journal of Organic Chemistry:, 5036-5044

Rachid,S.; Krug,D.; Kunze,Brigitte*; Kochems,I.; Scharfe,Maren*; Zabriskie,T.M.; Blöcker,Helmut*; Müller,R.; (2006). Molecular and biochemical studies of chondramide formation-highly cytotoxic natural products from Chondromyces crocatus Cm c5. Chemistry and Biology: 13 6, 667-681

Leonhäuser,J.; Röhricht,M.; Wagner-Döbler,Irene*; Deckwer,Wolf-Dieter*; (2006). Reaction engineering aspects of microbial mercury removal. Engineering in Life Sciences: 6, 139-148

Pauling,B.V.; Wagner-Döbler,Irene*; (2006). Stream microcosm for investigating GEM impact on the Autochthonous Bacterial Community in River Water and Sediment. Process Biochemistry: 41 10, 2129-2137 HZI-Repositorium

Biebl,H.; Allgaier,M.; Tindall,B.; Koblizek,M.; Lünsdorf,H.; Pukall,R.; Wagner-Döbler,I.; (2005). Dinoroseobacter shibae , gen. nov., sp. nov., a new aerobic phototrophic bacterium isolated from dinoflagellates. International Journal of Systematic and Evolutionary Microbiology: 55, 1089-1096 Volltext HZI-Repositorium

Wagner-Döbler,I.; Thiel,V.; Eberl,L.; Allgaier,M.; Bodor,A.; Meyer,S.; Ebner,S.; Hennig,A.; Pukall,R.; Schulz,S.; (2005). Discovery of complex mixtures of novel longchain quorum sensing signals in free-living and host-associated marine Alphaproteobacteria. ChemBioChem: 6 12, 2195-2206

Barkay,T.; Wagner-Döbler,I.; (2005). Microbial transformations of mercury: potentials, challenges, and achievements in controlling mercury toxicity in the environment. Advances in Applied Microbiology: 57, 1-52 Volltext

Dickschat,J.S.; Reichenbach,H.; Wagner-Döbler,I.; Schulz,S.; (2005). Novel pyrazines from the Myxobacterium / Chondromyces crocatus / and Marine Bacteria. European Journal of Organic Chemistry: 2005 19, 4141-4153 Volltext HZI-Repositorium

Biebl,H.; Allgaier,M.; Lünsdorf,H.; Pukall,R.; Tindall,B.J.; Wagner-Döbler,I.; (2005). Roseovarius mucosus , sp. nov., a novel member of the Rosebacter clade with trace amounts of bacteriochlorophyll a.. International Journal of Systematic and Evolutionary Microbiology: 55, 2377-2383 Volltext HZI-Repositorium

Dickschat,J.; Wagner-Döbler,I.; Schulz,S.; (2005). The chafer pheromone buibuilactone and ant pyrazines are also produced by marine bacteria. Journal of Chemical Ecology: 31, 925-947 PubMed

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